Streptococcus ratti: FY406_05530
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Entry
FY406_05530 CDS
T06620
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
srat
Streptococcus ratti
Brite
KEGG Orthology (KO) [BR:
srat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srat03019
]
FY406_05530
03009 Ribosome biogenesis [BR:
srat03009
]
FY406_05530
Enzymes [BR:
srat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FY406_05530
Messenger RNA biogenesis [BR:
srat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FY406_05530
Ribosome biogenesis [BR:
srat03009
]
Prokaryotic type
rRNA helicases
FY406_05530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QEY07141
LinkDB
All DBs
Position
1114055..1115398
Genome browser
AA seq
447 aa
AA seq
DB search
MTFTDFAFKDYINQALAALHFEEPTEVQKRLIPLVLSGQDLVGESKTGSGKTHTFLLPVF
QTLEEDLETVQTVITAPSRELARQIYEAAKQIAAFSDKEIRLAYYVGGTDKLRQIEKLKA
GQPQIVIGTPGRIYDLVQSGYLDIHKARTFVVDEADMTLDMGFLDTVDKIAATLPKDVQI
LVFSATIPQKLQPFLKKYLSNPIMEKIQNHTVIADTISNWLISTKGRDKNSQILEIAQLL
NPYLAIIFVNTKERADELHAYLTANGLKAAKIHGGIPPRERKRVMNQVKKLQFEYIVATD
LAARGIDIEGVSHVINDSIPQDLSFFVHRVGRTGRMGLSGTAITLYQPSDDSDIRELEKM
GIAFTPKIVKNGDIQDTYDRDRRINREKTYQKLDTEMIGLVKKKKKKIKPGYKKKIQWKV
DEKRRKARRVEARAKGRAERKAKRQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacatttacagattttgcatttaaagactatatcaatcaggctcttgcagctctgcat
tttgaagagccgacagaggtgcaaaagcgcctgattcctcttgtcttatccggacaggat
ttggttggagaatcaaagacaggctcaggaaaaacacatacttttttgctgcctgttttt
caaacactagaggaagatctcgaaacagtacagactgtgattacagcacccagccgtgaa
ttggccagacagatttatgaggctgctaagcaaatcgctgctttttcagacaaggaaatc
cgccttgcttactatgtaggcggaacagataagctgcgccagattgaaaaattaaaagcc
ggtcagccgcaaattgttatcggcacgccggggcgtatttatgacctcgttcaatcgggc
tatcttgatattcacaaggcacgcacatttgttgttgacgaggcggatatgacgcttgat
atgggctttttggacacagtggataagattgctgctaccctgcccaaagacgttcagata
ctagtcttttcggcaactatcccgcaaaaactgcagcctttcttaaaaaaatatctgagc
aatcccatcatggaaaaaattcaaaatcatacggttattgcagataccattagtaattgg
ctaatctcaaccaagggccgcgataaaaacagccaaattttggaaattgctcagctgctg
aatccatacttggcgattatttttgtcaataccaaggagcgggcagatgaactgcatgcc
tatctgacggctaatggtctgaaagcagccaagattcacgggggcattccgccgcgtgaa
cgtaagcgtgtgatgaatcaggtgaaaaagctgcagtttgaatacattgtggcaacagac
cttgctgcgcggggaattgatattgaaggagtcagtcatgtgatcaatgactctattccg
caggatctgtccttctttgtgcaccgtgtaggacgtaccggccgcatggggctttccggg
acagctattacactttatcagccaagtgatgattcggatatcagagaacttgaaaagatg
ggtattgcctttacaccgaaaattgtaaaaaatggtgacattcaggatacttatgaccgt
gaccgccgcatcaaccgtgagaagacttaccaaaaactagatactgaaatgattggtttg
gtgaagaaaaaaaagaaaaaaattaagccgggctataaaaagaaaattcagtggaaggta
gacgaaaaacggcgcaaagcccgccgtgtggaagcgcgtgctaagggtcgtgcagagcgc
aaggccaaaagacaaagcttttaa
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