Streptococcus ratti: FY406_09335
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Entry
FY406_09335 CDS
T06620
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
srat
Streptococcus ratti
Pathway
srat03420
Nucleotide excision repair
srat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
srat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FY406_09335 (pcrA)
03430 Mismatch repair
FY406_09335 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srat03400
]
FY406_09335 (pcrA)
Enzymes [BR:
srat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FY406_09335 (pcrA)
DNA repair and recombination proteins [BR:
srat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FY406_09335 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FY406_09335 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEY07834
LinkDB
All DBs
Position
complement(1871819..1874101)
Genome browser
AA seq
760 aa
AA seq
DB search
MNPLLDGMNDKQAEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFVNPWNILAITF
TNKAAREMRERAMALNPATRDTLIATFHSMCVRILRRDADHIGYNRNFTIVDPGEQRTLM
KRIIKNLNLDSKKWNERAILGTISNAKNDLIDEVAYENQAGDMYTQIVAKCYKAYQEELR
RSEAMDFDDLIMLTLRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPQAKVVLLEENYRSTKKILQAANEVIKNNRK
RRPKKLWTQNADGEKIVYYRADDERDEAVFVASTIDNIVRETGKSFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVIAYLNVIANSADNISFERIVNEPKRGVGPG
TLEKIRTFANLQDMSLLEASEQIMLSSIKGKAAQAVWDLANTLLGLRSDLDQYSISELVE
NVLEKTGYMEALQLQNTLESQARIENIEEFLSVTKNFDENTEEAPEDETGLDKLSRFLND
LALIADTDEGDTEAAEVTLMTLHAAKGLEFPVVFIIGLEEGVFPLSRSIEEEDELEEERR
LAYVGITRAEELLFITNANARTLFGRTDYNRESRFIKEISEDLLAYQGLARPAASSFKAS
YADDRPVKFGQGMSLAQALQARKTAAQPTKTKLPLANAATQADDTPATDWKIGDIACHRK
WGDGTVLEVSGSGKTQELKIKFPDVGLKKVLASLAPIEKK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattagatggaatgaatgataagcaggcagaggctgttaaaacaacagaa
ggcccgcttttgattatggcaggcgctggttctggcaagacacgtgttttaacacatcgc
attgcctacttaattgatgaaaaatttgtaaatccttggaatattttagctattaccttt
accaataaagcggcgcgtgagatgcgtgaacgggctatggctttgaatccggcgaccaga
gacactttgattgcgactttccactctatgtgcgtgcgaattttgcgccgtgatgctgac
cacattggctataaccgcaatttcaccattgttgacccaggtgagcagcgcaccctcatg
aaacgtattattaagaatcttaatctggattctaaaaaatggaatgagcgggcgatttta
ggcaccatttccaacgctaagaacgatctgattgatgaagtagcttatgaaaatcaagca
ggtgatatgtacacccaaattgtggccaagtgctataaggcttatcaggaggaactgcgc
cgcagtgaagccatggattttgatgatttaatcatgctgaccctgcggctcttcgataaa
aatcctgatgtattggcctattatcagcagcgctaccagtatatccatgtggatgagtat
caggataccaaccatgctcagtatcagctggtcaagctcttagcatcgcgctttaaaaat
atttgtgtagtcggtgatgcggatcagtcaatctatggttggcgcggtgctgatatgcag
aatatccttgattttgagaaggactatcctcaggctaaagtcgttcttcttgaagaaaat
taccgctcgacgaaaaaaattctgcaggccgcaaatgaagtgattaaaaacaatcgcaag
cgccgtcctaaaaagctctggacgcagaatgctgatggcgagaaaattgtctattacagg
gcagatgatgaacgtgacgaggctgtttttgtcgcttcaactattgataatattgttcgt
gaaacgggtaagagcttcaaagattttgctgtcctttaccgtaccaatgcccagtcccgt
accattgaagaagctctgctcaaatctaatattccatataccatggttggcggtactaaa
ttttacagccgcaaggaaattcgtgatgtcattgcttatcttaatgtcattgctaacagc
gcagataatatctcttttgaacgtattgtcaatgaacctaagcgcggcgtcggacccggt
accttggaaaaaattcggacctttgccaatctgcaagatatgagtctgctggaagcgtct
gagcaaattatgctctcaagcatcaaaggaaaagctgctcaggctgtctgggatctggct
aatacgctgcttggcctgcggtctgacttggaccagtacagcatcagcgaactggttgaa
aacgtcttagaaaagaccggctatatggaagctctgcagctgcaaaatacactggagagt
caggcacgtattgaaaatattgaggaattcctatctgttacgaagaattttgatgaaaac
accgaagaggctcccgaagatgaaacaggtcttgataaactcagccgtttcctcaacgac
ttagctctgattgccgatactgatgaaggcgataccgaagcagctgaggtaactttgatg
actctgcatgctgccaagggcttggagtttccagttgtctttattatcggccttgaagaa
ggtgtctttcctttgtcgcgctccattgaagaagaagatgaattagaagaagagcgtcgt
ctggcctatgttggtatcacacgggcagaagagctgttattcatcaccaatgcaaatgct
cgtacgctttttggccggacggattacaaccgtgaaagccgttttattaaggaaatttca
gaagatttattggcttatcaaggcttggcacgccccgcagcaagctcctttaaagccagt
tatgctgatgacaggcctgtcaaatttggtcaaggcatgagcctagctcaggctctgcag
gcccgtaaaactgcggcgcagccaacaaagaccaagctgcctctggcaaatgctgccaca
caggctgatgatacaccagctaccgattggaagattggcgatattgcctgccaccgcaaa
tggggagatggcaccgtcttggaagtctcaggcagcggcaagacccaagaacttaaaatt
aagtttccggacgttggtctcaaaaaggttctagccagccttgcacccatcgaaaagaaa
taa
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