KEGG   Streptococcus ratti: FY406_10330
Entry
FY406_10330       CDS       T06620                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
srat  Streptococcus ratti
Brite
KEGG Orthology (KO) [BR:srat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:srat02048]
    FY406_10330
Enzymes [BR:srat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FY406_10330
Prokaryotic defense system [BR:srat02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    FY406_10330
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C ResIII AAA_22 HD AAA_16
Other DBs
NCBI-ProteinID: QEY08097
LinkDB
Position
complement(2088120..2090822)
AA seq 900 aa
MQHLEDTMNVAGLLWEHWLGEGQRQLIEASLSSSQSNDDFGKQVIQFLAATHDLGKATPA
FQTQKGYANSEDLDIQLLEKLERAGFAGISFVDLANPRESHHSIAGQYLLSRYGVHDDLA
TIVGGHHGKPIDNITDYTNQKAYESNFFQTEKPDSTIYRKWDRAQRDIFEWALEVSGFSS
VEELPRVKQPAQVILSGLLIMADWIASNESYFPLISVEENEVGNKVNRLETGFMAWRQSG
LWESSIKETRDIFERRFRFVPHDVQRVLSDKILQSQRPGIFILEAPMGIGKTEAALVAAE
QLAAKTGRNGLYFGLPTQATSNGIFPRIEKWLESIAAEQNVDDHLSIHLVHGKAALNEKF
AEILRSTNINIDESDNGSVVVNEWFSGRKTTALDDFVVGTVDQFLMVALKQKHLALRHLG
FSKKVVVIDEVHAYDAYMNQYLLEAVKWMGAYGVPVVILSATLPADRRVELIINYLDGMG
RKIRKPERKSLVDKFGSESYPVITYTDGFDIYQETDFPKRDNKNMVISRLQEEDLIETIE
NQLSGGGIVGLIVNTVRRAQDLAKRLSEKFGEDIVELLHSGFIATDRIRKEQNLLQMIGK
GADRPKKKIIVGTQVIEQSLDIDFDVLISDLAPMDLLIQRMGRLHRHDIKRPVNHQRPYF
YVLGMTDNLDFESGTSFVYGDYLLIRTQYFLPDTVTIPEDISSLVQKVYRNSDIDFEDEN
LNKKYQVAKNGHDVKIERQENKAKNYRIADPILVESISHKGNLIGWLKNPNLSESEETSY
SQVRDIEETIEVIALKKVESGYGLFGKDKDISDYITDYQLAREVAQNTLRLPQSLSKSYN
IDQSIKELENYNNQHLPTWRKSTWLKGALGIIFDENNEFVLNGRKLRYNEKYGISMEEVE
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgcaacatttagaagacacgatgaatgttgctggattactgtgggagcattggttaggt
gagggacaacggcaacttattgaagcgtctttaagttctagtcaatcaaacgatgatttt
gggaaacaagtgattcaatttttagcggctacacacgacctaggaaaggctacacctgcc
tttcaaacgcagaaagggtatgcgaattctgaggatttagatatccaactattagaaaaa
ctagaacgtgctggatttgctggcatttcttttgttgacttagctaatcctagagaaagt
catcatagcattgcaggtcaatatcttttgtctagatatggtgttcatgatgatttggca
accatagttggtggtcaccatggaaaaccaattgataatattaccgactatacaaatcaa
aaagcttatgaatctaattttttccaaacagaaaagccagatagtactatttacagaaag
tgggatagagctcaaagggatatttttgaatgggctttggaggtaagtggcttttcttct
gtagaagagcttcctagggttaaacaacccgctcaagtgattttatcaggcttactgatt
atggccgactggattgcgagtaatgaatcctattttcctttgatatctgttgaggagaat
gaagttggaaataaggtgaatagacttgaaactggctttatggcatggagacaaagcgga
ctttgggaatcttctataaaagaaactcgagatatttttgaaagacgttttagatttgtc
ccccatgatgttcaaagagtactatcagataagattcttcaatcgcaaaggccaggtatt
tttattttagaagctcctatgggaatcggcaaaacagaggcagctttagttgctgctgaa
caactggctgctaagacaggaagaaatggcctttattttggtttgcctacccaggcaact
tcaaacggtatctttccacgcatagagaaatggttggaaagtatagcagcagaacaaaat
gtagatgaccatctatctatccatttagtacatggtaaagctgctctgaatgagaagttt
gctgagattcttcggagcaccaatatcaatattgatgaatctgacaatggtagcgttgtt
gttaatgagtggttttctggtaggaaaactactgctttagatgattttgtagttggaaca
gttgaccaatttttgatggtagccttaaaacaaaaacatctggctttacgtcatttggga
tttagtaaaaaggttgtcgttatcgacgaagtacacgcctatgatgcttatatgaatcaa
tacctacttgaagctgttaaatggatgggagcttatggtgtccccgtcgttatcctatca
gccaccttaccagcagatagaagagtggaactcattataaactatctcgatggaatgggg
cgaaaaattcgtaaaccagagagaaagtcccttgttgataagtttggaagcgagtcttat
cctgtaattacatacactgatggttttgacatttatcaggaaactgattttccaaagcgg
gataataagaatatggtcatcagtcgtttgcaggaagaagaccttatagaaaccattgaa
aatcaactatctggcggtggaattgttggcctgattgtgaatacggtgcgaagagcacaa
gacttagctaagcgtttatccgaaaaatttggtgaagatatagtagaactgctgcattca
ggatttatagcgacagatcgtattcgtaaagaacaaaacttgttgcaaatgataggtaaa
ggtgctgataggcctaagaaaaaaattattgttgggacacaagtcattgagcaatcttta
gatattgattttgatgtgttgattagtgacttagcacctatggatttactgattcagcgg
atggggcgcctgcaccgtcatgatattaagcgtccagtaaaccatcaaagaccctatttt
tatgtgctaggtatgactgacaatttagattttgaaagtggtacatcttttgtctatgga
gattatttgctgatacgaacgcaatattttttgccggatacagtgactattccggaagat
atttcttctttagttcagaaagtttataggaattcagatattgattttgaggatgaaaat
ctgaataaaaagtatcaggttgccaagaatggacatgatgttaaaattgaacgtcaagaa
aataaggcaaaaaattaccggattgctgatcccattcttgtagaaagtataagtcacaaa
ggcaatctgattggctggttaaaaaatcctaacctttctgaaagcgaagaaacatcgtat
tctcaagtacgagatattgaagaaaccattgaagttatcgctctaaagaaagtagaatct
ggatatggtttgtttggtaaagataaggatatttcagactatattactgactatcagcta
gcaagagaagtagctcaaaataccttacggcttccacaatctctgtctaaatcatataat
atcgatcagtcaattaaagagctggaaaactataataatcagcatttaccaacatggcga
aagagcacttggttgaaaggagcgttgggcatcatttttgatgaaaataatgaattcgtt
ctcaatggaagaaaattacgatacaatgaaaaatacggtatctcaatggaggaggtagaa
tag

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