Candidate division SR1 bacterium RAAC1_SR1_1: P148_SR1C001G0403
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Entry
P148_SR1C001G0403 CDS
T02946
Name
(GenBank) hypothetical protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
srb
Candidate division SR1 bacterium RAAC1_SR1_1
Brite
KEGG Orthology (KO) [BR:
srb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srb03009
]
P148_SR1C001G0403
Enzymes [BR:
srb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
P148_SR1C001G0403
Ribosome biogenesis [BR:
srb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
P148_SR1C001G0403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Focal_AT
Motif
Other DBs
NCBI-ProteinID:
AHB41198
LinkDB
All DBs
Position
418618..419292
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AA seq
224 aa
AA seq
DB search
MIRLDKYLANLGLISRRTADKIFKSTEILVNGTITTKSDTKITYGDVITFDGIEIDVLES
VHVILYKPAGYISSDEDENKYLSYRHLLQDCPYVNMLHVAGRLDHDTEGLLMASTSGTFI
HQVISPKLNKEKEYEVHLGRNISDKDLGELAKGVTLDDGYHTLPAKVQRLEPKKILLTIT
EGKFHQVKRMLEAVDNQVIYLKRLRIGEWTLEGLEKGKWKYIEK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtcttgataaatatcttgcaaatttatgattaattagcagaagaactgctgat
aaaattttcaaatcaacagaaattttggtaaatggaacaataacaacaaaatctgataca
aaaatcacgtacggtgatgtaataacatttgatggtatcgaaatcgacgtattggaatct
gttcatgttattctttataaaccagcaggctatatttcgtctgatgaagatgaaaataaa
tatttgagttataggcacttactccaagattgtccctacgtaaatatgctccatgtagca
ggaagactagatcatgataccgaatgattattgatggcaagtactagtggtaccttcatt
catcaggtaattagtccaaaattaaacaaagaaaaagaatatgaagttcacctcggcaga
aatatttcagataaagatctcggggagctagcgaagggagtaaccttagatgacggctac
cacaccctccccgccaaagtccagagattagaacccaaaaaaattctcctcaccattacc
gaaggtaagtttcatcaggtaaagagaatgttggaagcagtagataatcaagttatttat
ctcaaaagactcagaataggtgagtggaccctggagggcttggagaaaggaaagtggaaa
tacattgagaagtaa
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