Candidate division SR1 bacterium RAAC1_SR1_1: P148_SR1C001G0417
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Entry
P148_SR1C001G0417 CDS
T02946
Name
(GenBank) Helix-hairpin-helix motif:HhH-GPD
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
srb
Candidate division SR1 bacterium RAAC1_SR1_1
Pathway
srb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P148_SR1C001G0417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srb03400
]
P148_SR1C001G0417
Enzymes [BR:
srb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
P148_SR1C001G0417
DNA repair and recombination proteins [BR:
srb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P148_SR1C001G0417
Prokaryotic type
P148_SR1C001G0417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
CtsR_C
Motif
Other DBs
NCBI-ProteinID:
AHB41212
LinkDB
All DBs
Position
complement(431472..432251)
Genome browser
AA seq
259 aa
AA seq
DB search
MNIPQNILDRYKKQGRILPWRQTKDPYAIHISEVMLQQTQVERVIPYFHQWMKDFPDYVS
LAKATKTDLLKHRSGLGFNSRALRLQACAQTVVEQYDGKLPNKRNQLLGLPGIGPYTSAA
ILAFAWNQEVPVIDTNIRRVLIFLYKLPETISLQELELFAEKIIPSGKSRDWHNALMDYG
ALELTARKTKIKPLSKQSKFEGSDRQVRGWILKQLTKDDKPLLISRVQEEFPNKDVADII
KGMLDEKLILKKKGTLILE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccctcaaaatattttggatcgatataaaaaacaaggaagaatacttccttgg
agacagacaaaagatccttatgcaatacatatttctgaagttatgttacaacaaactcag
gtggagagagtcatcccctattttcatcaatggatgaaagattttcctgattatgtaagt
ttagcaaaggcaacaaaaaccgaccttttgaaacatcggtcgtgacttggatttaatagt
agagctttgagattgcaagcctgtgcacaaacagtcgttgaacaatatgatggaaaatta
ccaaacaaaagaaaccagcttttatgattgccttgaatttgaccctatacttcagctgct
attctggcttttgcttggaaccaagaagtgccagtgattgataccaatatcagaagagta
cttatcttcttatacaaacttcctgaaactatttcacttcaagaactcgaactcttcgca
gaaaaaattataccgtcaggaaaatctcgtgattggcataatgcattgatggattatgga
gcattagaactcactgcaagaaagaccaaaatcaaacccctttccaaacaatcaaaattt
gaaggttctgatagacaagtgagaggatggattttgaagcagttgaccaaagatgataaa
ccccttttgatttctcgtgtgcaggaagaatttcctaacaaagatgttgcagatattatc
aagggaatgctggatgaaaagttgatactcaagaaaaaatgaacacttattttagaataa
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