Candidate division SR1 bacterium RAAC1_SR1_1: P148_SR1C001G0986
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Entry
P148_SR1C001G0986 CDS
T02946
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srb
Candidate division SR1 bacterium RAAC1_SR1_1
Pathway
srb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P148_SR1C001G0986 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srb03021
]
P148_SR1C001G0986 (rpoA)
03400 DNA repair and recombination proteins [BR:
srb03400
]
P148_SR1C001G0986 (rpoA)
Enzymes [BR:
srb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P148_SR1C001G0986 (rpoA)
Transcription machinery [BR:
srb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P148_SR1C001G0986 (rpoA)
DNA repair and recombination proteins [BR:
srb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P148_SR1C001G0986 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHB41772
LinkDB
All DBs
Position
complement(1074733..1075725)
Genome browser
AA seq
330 aa
AA seq
DB search
MLDIQKLIGAPRIVVSESDERTTKFEVKYLPRGFGHSLGNALRRIILGYSIGAAVTGLKI
KGVSHEYHVVDGVLENVITIMLNFKSLRFKFDDGIDAIQWISQRFSGVGIYTAKDIKLPA
GVELLNPDVRLFEITDPSVELNMDIRIEKGYGYYSIDFLRSRDKKEDSDVNILLIDNEFK
LVDLIQYEVEEVIEDFTGSTKDLLVLEVKAGYSGVSAKEILMFAGEILASYAKLFVFDNI
YIDRSVLIDMDDLVQETARTEHEVGVKTMPIDALPLSERTRNALIKNNILYVEDLEKKKK
GELLLMKGVGRKAIDEIVSSLANISKSLIG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgttagatatccaaaaacttatttgagctccaagaattgttgtttcagaatcagatgaa
agaaccactaagtttgaagtgaaatacttaccaagatgatttggtcattctttgggaaat
gctttgagaagaataattttgtgatacagcattggtgctgcagttacaggacttaaaatc
aaaggagtttctcatgaatatcatgttgttgatggtgttcttgaaaatgtgattactatt
atgcttaactttaagtctttacgctttaagtttgatgatggtattgatgctattcaatgg
atatctcaaagattttctggagttgggatttatactgcaaaagatattaaacttcctgca
ggtgtagaattattaaatccagatgttcgtttgtttgaaataactgatccttcagttgaa
ttaaatatggatattagaatagaaaaaggatatggatattacagtattgatttcttgaga
agtcgtgataaaaaagaagatagcgatgtaaatattttgcttatagataatgaatttaaa
ttggttgatttaatccaatatgaagtagaagaagttatagaagattttacaggttctaca
aaagatttgttagtattggaagtaaaagcatgatatagtggtgtttctgcaaaagaaatc
cttatgtttgcttgagaaatattggcgtcttacgctaaattatttgtctttgataatata
tatattgatagatcagtattgattgatatggatgatcttgttcaagaaacagctagaaca
gaacatgaagttggtgtaaaaacaatgccaattgatgctcttcctttgagtgaaagaaca
agaaatgctttgatcaaaaataatatattgtatgttgaagatcttgaaaagaagaagaaa
ggagaattattattgatgaaaggagttggaaggaaagctatcgatgaaattgttagttca
ctagctaatattagcaaatctttgatcggataa
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