Streptomyces rapamycinicus: M271_06040
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Entry
M271_06040 CDS
T02907
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_06040
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_06040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
KORA
HTH_Crp_2
HTH_24
HTH_3
DUF7343
GerE
MarR_2
MarR
YdaS_toxin
HTH_26
UPF0122
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AGP52834
UniProt:
A0A0A0N867
LinkDB
All DBs
Position
1601861..1602679
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AA seq
272 aa
AA seq
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MTTATQDMTRPRTGPTKHPHDDAPDTSTEFAEMARLPDGPEKEALCRRVVEAWMPMAERL
ARQYRNRGESLEDLQQVAALGLVKAVKRYDPEHGTAFAGFAVPTIVGEIKRHFRDHLWVL
HVPRRVQDLRNRVRAAHRELSHGVDDRPPRAQEIAERTGLTEKEVRAGMEAMGSYTPLSL
DAQPTGADDGYSLADTLGAQEPAYDRVVDREAVRPGLSRLPDRERQILYMRFFCDMTQSR
IAEQLGISQMHVSRLINRTCSTLRAQALAEAN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgcgacgcaggacatgacacggccccggaccggccccacgaagcacccgcac
gacgacgcgccggacaccagcaccgagttcgcggaaatggcccggctccccgacggcccg
gagaaggaggcgctgtgccgccgggtcgtggaggcgtggatgccgatggccgaacggctg
gcccggcagtaccgcaaccgcggcgaatccctggaggatctgcagcaggtggccgcgctc
ggcctggtgaaggccgtcaagcggtacgacccggaacacggcaccgccttcgccgggttc
gcggtgcccacgatcgtcggcgagatcaagcgccacttccgggaccatctgtgggtgctg
catgtcccccgccgggtccaggatctgcgcaaccgggtgcgggccgcccaccgcgagctg
tcccacggggtggacgaccggccgccgcgggcccaggagatcgccgagcgcaccgggctg
accgagaaggaggtgcgcgccggcatggaggccatgggcagctacaccccgctctccctg
gacgcccagccgaccggcgcagacgacggctactcgctggccgacacgctcggcgcccag
gagcccgcgtacgatcgggtggtggaccgcgaggcagtgcgccccggtctcagccggctc
cccgaccgggagcggcagatcctttacatgcgtttcttctgcgatatgacacagagccgg
atcgccgagcagctgggcatctcccagatgcacgtctcacggctcatcaaccgcacctgc
tccaccctgcgcgcacaggcgctcgccgaggccaactga
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