Streptomyces rapamycinicus: M271_12790
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Entry
M271_12790 CDS
T02907
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_12790
Enzymes [BR:
src01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
M271_12790
DNA repair and recombination proteins [BR:
src03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
M271_12790
Prokaryotic type
M271_12790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF7291
Motif
Other DBs
NCBI-ProteinID:
AGP54152
UniProt:
A0A0A0N555
LinkDB
All DBs
Position
3334345..3335709
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AA seq
454 aa
AA seq
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MSTSLSVFTSDLRLSDNPVLRGALCSAERIVPLFVVDRGLAGTGFAVPNRVAFLADALTD
LDAGLRERGGRLVVRRGEAVAEILRAARQADADEVHIAGGVSGYAARRERRLRGALEADG
RRLRVHGAVVTAVEPGEVAPAGKDHFAVFTPYFRAWRRAGQPKPLTAPRTVGVESGLRSE
PVAAVTSLAPGSPSPGLPEGGETAGRRRMRSWWRSGLGSYADRQDDLAGDATSRLSPYLH
FGCLSPVELVHRAREAGGAGADAFVRQLAWRDFHHQVLAARPDASYADYRPRGDRWREDA
AEVAAWKAGRTGYPLVDAGMRQLRHEGWMHNRARLLVASFLTKTLYQDWRIGARHFLELL
VDGDVANNQLNWQWAAGTGTDTRPNRVLNPLAQARRFDPDGAYVRRWVPELAGVTGSGVH
TPWRLPEAERDRLDYPDPIVDLQEGLARFRRARG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtccctctccgtcttcacctccgatctgcggctgtccgacaaccccgtgctg
cgcggcgcgctgtgctccgccgagcggatcgtgccgctgttcgtcgtggaccgtggcctg
gccgggacggggttcgcggtccccaaccgggtggcgttcctcgcggacgcgctgaccgat
ctcgacgcggggctgcgcgagcgcggcgggcggctggtggtccgccggggggaggcggtg
gcggagatcctgcgggcggcgcggcaggcggacgcggacgaggtgcacatcgcgggcggg
gtgagcggctacgccgcccgccgcgagcggcggctgcgcggggcgctggaggcggacggg
cggcggctgcgggtgcacggcgcggtggtgacggcggtggagccgggcgaggtggccccg
gcgggcaaggaccacttcgcggtcttcaccccgtacttccgcgcctggcggcgggccggg
cagccgaagccgctcaccgcgccgcgcacggtgggcgtggagtccgggctgcgctcggag
ccggtggcggcggtcacctcgctcgccccgggcagcccctcccccggactgcccgagggc
ggggagacggcgggccgccgccggatgcgctcctggtggcggtcgggcttggggagttac
gccgaccggcaggacgatctggcgggcgacgccacctcccggctctccccgtatctgcac
ttcggctgtctgtccccggtggagctggtgcaccgggcgcgggaggcgggcggcgcgggc
gccgacgccttcgtacggcagctggcctggcgggacttccaccaccaggtgctggccgcc
cggccggacgcctcgtacgccgactaccgcccgcggggcgaccggtggcgcgaggacgcg
gcggaggtcgcggcctggaaggcggggcgcaccggctatccgctggtggacgcggggatg
cgacagctgcgccacgagggctggatgcacaaccgggcgcggctgctggtggcgagcttc
ctcaccaagacgctctaccaggactggcggatcggcgcccggcacttcctggagctgctg
gtggacggggatgtggccaacaaccagctgaactggcagtgggcggcgggcaccggcacc
gacacccgccccaaccgggtcctcaatccgctggcgcaggcccggcggttcgacccggac
ggcgcgtatgtgcggcgctgggtgccggagctggccggggtgaccggctccggcgtccat
acgccctggcggctgccggaggccgagcgggaccggctggactacccggacccgatcgtg
gacctccaggaggggctggcccgcttccggcgcgcccggggatga
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