Streptomyces rapamycinicus: M271_13545
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Entry
M271_13545 CDS
T02907
Name
(GenBank) ribonuclease
KO
K01167
ribonuclease T1 [EC:
4.6.1.24
]
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
src03019
]
M271_13545
03016 Transfer RNA biogenesis [BR:
src03016
]
M271_13545
Enzymes [BR:
src01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.24 ribonuclease T1
M271_13545
Messenger RNA biogenesis [BR:
src03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M271_13545
Transfer RNA biogenesis [BR:
src03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
M271_13545
Prokaryotic type
M271_13545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease
Motif
Other DBs
NCBI-ProteinID:
AGP54302
UniProt:
A0A0A0N5G4
LinkDB
All DBs
Position
complement(3507746..3508174)
Genome browser
AA seq
142 aa
AA seq
DB search
MTIPPRIARIGALGALVSTLLIGGAATAATAVTPAASQTVASSQVIAAVGDICYSDLPSQ
AHDTLDLIEKGGPYPFPQDGTVFQNREGVLPSQSSGYYHEYTVITPGSDDRGARRIVTGK
QTDEDYYTADHYASFDLVDRGC
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccccccacggatcgcccgcatcggtgccctcggtgccctcgtctcgacgctg
ctcatcggcggcgcggccaccgcggccaccgccgtcaccccggcggcatcgcagaccgtt
gcgtcgtcgcaggtcatcgccgccgttggcgacatctgctactcggatctgccctcccag
gcccatgacaccctggacctgatcgaaaagggcggcccctacccgttcccgcaggacggc
accgtcttccagaaccgtgaaggcgtccttccgtcccagtcctccggctactaccacgag
tacaccgtgatcaccccgggctccgacgaccgtggcgcccggcgcatcgtcaccggtaag
cagacggacgaggactactacaccgcggaccactacgcctcgttcgacctggtggaccgc
ggctgctga
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