Entry |
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Name |
(GenBank) 3'-5' exonuclease
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KO |
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Organism |
src Streptomyces rapamycinicus
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Brite |
KEGG Orthology (KO) [BR:src00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:src03016]
M271_14335
Enzymes [BR:src01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
M271_14335
Transfer RNA biogenesis [BR:src03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
M271_14335
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3704923..3706110
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AA seq |
395 aa
MLEPREGIPPVTADADTLAEVIATFAAGHGPVAVDAERASGYRYGQRAYLVQLRRAGAGT
ALIDPVGCPDLSGLGAAIADAEWVLHAATQDLPCLRDIGMVPARIFDTELAGRLAGFARV
GLGAMVENILGYALEKGHSAVDWSTRPLPEPWLHYAALDVELLVDLRNALEDELERQEKL
EWAHQEFAAIAAAPPAPPRKDPWRRTSGMHKVRRRRQMAVVRELWTARDRIAQRRDVSPG
KVLGDAAIVEAALALPGDVRALTALNGFGHRMNRRQLEQWQAAVDRARALPEADLPQPGQ
PVAGPPPPRAWADKDPAAAARLSAARAAVTQLAEQLNLPQENLIAPDTVRRLCWEPPAEP
TTDAIASVLAGHGARPWQIDQVTPVLTAALLTPPA |
NT seq |
1188 nt +upstreamnt +downstreamnt
ttgctggagccgcgcgagggcatcccgcccgtcaccgccgacgcggacacgctggccgag
gtcatcgcgaccttcgccgcgggccacggcccggtggccgtcgatgccgagcgcgcctcc
ggctaccgctacggacagcgggcctatctggtccagctgcgccgggccggagcggggacc
gcactgatcgaccccgtcggctgccccgacctctcgggtctgggcgccgcgatcgccgac
gccgaatgggtcctgcacgccgcgacccaggatctgccctgtctgcgggacataggcatg
gtcccggcccggatcttcgacaccgaactcgcgggccggctggccgggttcgcccgggtg
gggctcggcgccatggtcgagaacatcctcggatacgccctggagaagggtcactccgcc
gtggactggtccacccgcccgctgcccgagccctggctgcactacgccgcgctcgacgtc
gagctgctggtggacctgcgcaacgcgctggaggacgagctggagcggcaggagaagctg
gagtgggcgcaccaggagttcgcggccatcgccgcggccccgcccgccccgccgcgcaag
gacccctggcggcgtacgtcggggatgcacaaggtccggcggcgccggcagatggccgtg
gtgcgcgagctgtggacggcccgggaccggatcgcccagcgccgcgatgtctcaccgggc
aaggtgctcggcgacgcggccatcgtcgaggccgcgctggccctgccgggagacgtccgg
gcgctgaccgcgctgaacggtttcggccaccggatgaaccggcgccagctggaacagtgg
caggccgcggtggaccgggcgcgggcgctgccggaggccgacctcccccagccgggccag
ccggtggccggtccgcccccgccgcgggcgtgggccgacaaggacccggcggccgcggcg
cggctctccgcggcgcgtgcggccgtcacccagctggccgaacagctgaatcttccgcag
gagaacctgatcgccccggacaccgtccggcggctgtgctgggagccgcccgccgagccg
acgacggatgcgatcgcgtccgttctcgcaggtcacggtgcccgcccctggcagatcgac
caggtgaccccggtgctgacagccgccttgctgacgccccccgcgtga |