KEGG   Streptomyces rapamycinicus: M271_14335
Entry
M271_14335        CDS       T02907                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
src  Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:src00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:src03016]
    M271_14335
Enzymes [BR:src01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     M271_14335
Transfer RNA biogenesis [BR:src03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    M271_14335
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: AGP54455
LinkDB
Position
3704923..3706110
AA seq 395 aa
MLEPREGIPPVTADADTLAEVIATFAAGHGPVAVDAERASGYRYGQRAYLVQLRRAGAGT
ALIDPVGCPDLSGLGAAIADAEWVLHAATQDLPCLRDIGMVPARIFDTELAGRLAGFARV
GLGAMVENILGYALEKGHSAVDWSTRPLPEPWLHYAALDVELLVDLRNALEDELERQEKL
EWAHQEFAAIAAAPPAPPRKDPWRRTSGMHKVRRRRQMAVVRELWTARDRIAQRRDVSPG
KVLGDAAIVEAALALPGDVRALTALNGFGHRMNRRQLEQWQAAVDRARALPEADLPQPGQ
PVAGPPPPRAWADKDPAAAARLSAARAAVTQLAEQLNLPQENLIAPDTVRRLCWEPPAEP
TTDAIASVLAGHGARPWQIDQVTPVLTAALLTPPA
NT seq 1188 nt   +upstreamnt  +downstreamnt
ttgctggagccgcgcgagggcatcccgcccgtcaccgccgacgcggacacgctggccgag
gtcatcgcgaccttcgccgcgggccacggcccggtggccgtcgatgccgagcgcgcctcc
ggctaccgctacggacagcgggcctatctggtccagctgcgccgggccggagcggggacc
gcactgatcgaccccgtcggctgccccgacctctcgggtctgggcgccgcgatcgccgac
gccgaatgggtcctgcacgccgcgacccaggatctgccctgtctgcgggacataggcatg
gtcccggcccggatcttcgacaccgaactcgcgggccggctggccgggttcgcccgggtg
gggctcggcgccatggtcgagaacatcctcggatacgccctggagaagggtcactccgcc
gtggactggtccacccgcccgctgcccgagccctggctgcactacgccgcgctcgacgtc
gagctgctggtggacctgcgcaacgcgctggaggacgagctggagcggcaggagaagctg
gagtgggcgcaccaggagttcgcggccatcgccgcggccccgcccgccccgccgcgcaag
gacccctggcggcgtacgtcggggatgcacaaggtccggcggcgccggcagatggccgtg
gtgcgcgagctgtggacggcccgggaccggatcgcccagcgccgcgatgtctcaccgggc
aaggtgctcggcgacgcggccatcgtcgaggccgcgctggccctgccgggagacgtccgg
gcgctgaccgcgctgaacggtttcggccaccggatgaaccggcgccagctggaacagtgg
caggccgcggtggaccgggcgcgggcgctgccggaggccgacctcccccagccgggccag
ccggtggccggtccgcccccgccgcgggcgtgggccgacaaggacccggcggccgcggcg
cggctctccgcggcgcgtgcggccgtcacccagctggccgaacagctgaatcttccgcag
gagaacctgatcgccccggacaccgtccggcggctgtgctgggagccgcccgccgagccg
acgacggatgcgatcgcgtccgttctcgcaggtcacggtgcccgcccctggcagatcgac
caggtgaccccggtgctgacagccgccttgctgacgccccccgcgtga

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