Streptomyces rapamycinicus: M271_15695
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Entry
M271_15695 CDS
T02907
Name
(GenBank) RNA polymerase sigma70
KO
K02405
RNA polymerase sigma factor FliA
Organism
src
Streptomyces rapamycinicus
Pathway
src02020
Two-component system
src02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
src00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
M271_15695
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M271_15695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_15695
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
src02035
]
M271_15695
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_15695
Bacterial motility proteins [BR:
src02035
]
Flagellar system
Flagellar assembly proteins
Stator
M271_15695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
UPF0122
HTH_31
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
AGP54713
UniProt:
A0A0A0NF50
LinkDB
All DBs
Position
complement(4061495..4062328)
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AA seq
277 aa
AA seq
DB search
MPQHISGSDSAAPPAARGAVHPAAPSSLDELWRSYKTTGDGRLREQLILHYSPLVKYVAG
RVSVGLPSNVEQADFVSSGVFGLIDAIEKFDPERAIKFETYAITRIRGAMIDELRALDWI
PRSVRQKARAVERAYATLEAQLRRTPSEAEVATEMSISLEELHGVFSQLSLANVVALEEL
LHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPEREKTVVTLYYYEG
LTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacatctccgggtctgacagcgcggcgccgcccgcggcccgcggcgcggtg
caccctgccgcgccctcatcgctcgacgagctgtggcggtcgtacaagaccacgggcgac
ggccggctgcgggagcagctgatcctgcactactcaccgctggtgaaatatgtggccggc
cgggtcagcgtcgggctgccctccaatgtcgagcaggcggacttcgtctcgtccggggtc
ttcggactcatcgacgccatcgagaagttcgaccccgagcgcgccatcaagttcgagacc
tacgcgatcacccggatccgcggcgcgatgatcgacgagctgcgggcgttggactggatc
ccgcggtcggtgcgccagaaggcccgggccgtggagcgggcgtacgccacgctggaggcc
cagctgcgccgcaccccctcggaggccgaggtggccaccgagatgagcatcagcctcgag
gaactgcacggcgtcttcagccagttgtcgctcgccaatgtggtcgccctggaggagctg
ctgcacgtcggcggcgagggcggtgaccggctcagcctcatggacaccctcgaggacacc
gcggcggacaaccccgtcgaggtggccgaggaccgggagctgcggcggctgctcgcccgg
gcgatcaacaccctcccggagcgggagaagaccgtagtcacgctctactactacgagggg
ctcacgctcgccgagatcggccaggtgctcggcgtcaccgagagccgggtcagtcagatc
cacaccaagtcggtgctccagctgcgggcgaaactcgccgacgtcgggcgctga
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