KEGG   Streptomyces rapamycinicus: M271_15695
Entry
M271_15695        CDS       T02907                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
src  Streptomyces rapamycinicus
Pathway
src02020  Two-component system
src02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:src00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M271_15695
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M271_15695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:src03021]
    M271_15695
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:src02035]
    M271_15695
Transcription machinery [BR:src03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M271_15695
Bacterial motility proteins [BR:src02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    M271_15695
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 Sigma70_ECF UPF0122 HTH_31 CENP-B_N
Other DBs
NCBI-ProteinID: AGP54713
UniProt: A0A0A0NF50
LinkDB
Position
complement(4061495..4062328)
AA seq 277 aa
MPQHISGSDSAAPPAARGAVHPAAPSSLDELWRSYKTTGDGRLREQLILHYSPLVKYVAG
RVSVGLPSNVEQADFVSSGVFGLIDAIEKFDPERAIKFETYAITRIRGAMIDELRALDWI
PRSVRQKARAVERAYATLEAQLRRTPSEAEVATEMSISLEELHGVFSQLSLANVVALEEL
LHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPEREKTVVTLYYYEG
LTLAEIGQVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq 834 nt   +upstreamnt  +downstreamnt
atgccccagcacatctccgggtctgacagcgcggcgccgcccgcggcccgcggcgcggtg
caccctgccgcgccctcatcgctcgacgagctgtggcggtcgtacaagaccacgggcgac
ggccggctgcgggagcagctgatcctgcactactcaccgctggtgaaatatgtggccggc
cgggtcagcgtcgggctgccctccaatgtcgagcaggcggacttcgtctcgtccggggtc
ttcggactcatcgacgccatcgagaagttcgaccccgagcgcgccatcaagttcgagacc
tacgcgatcacccggatccgcggcgcgatgatcgacgagctgcgggcgttggactggatc
ccgcggtcggtgcgccagaaggcccgggccgtggagcgggcgtacgccacgctggaggcc
cagctgcgccgcaccccctcggaggccgaggtggccaccgagatgagcatcagcctcgag
gaactgcacggcgtcttcagccagttgtcgctcgccaatgtggtcgccctggaggagctg
ctgcacgtcggcggcgagggcggtgaccggctcagcctcatggacaccctcgaggacacc
gcggcggacaaccccgtcgaggtggccgaggaccgggagctgcggcggctgctcgcccgg
gcgatcaacaccctcccggagcgggagaagaccgtagtcacgctctactactacgagggg
ctcacgctcgccgagatcggccaggtgctcggcgtcaccgagagccgggtcagtcagatc
cacaccaagtcggtgctccagctgcgggcgaaactcgccgacgtcgggcgctga

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