Streptomyces rapamycinicus: M271_15970
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Entry
M271_15970 CDS
T02907
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
src03032
]
M271_15970
03036 Chromosome and associated proteins [BR:
src03036
]
M271_15970
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_15970
DNA replication proteins [BR:
src03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M271_15970
Chromosome and associated proteins [BR:
src03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M271_15970
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M271_15970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Extensin_1
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AGP51559
UniProt:
A0A0A0N5H6
LinkDB
All DBs
Position
complement(4118603..4119178)
Genome browser
AA seq
191 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVSGERVSVTGFGSFEKVERPARYAR
NPQTGERVRVKKTSVPRFRPGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLQVAAKKAAAK
KATAKKAPAKKAAAKKATAKKAPATKATAKKAPAKKTTAKKAPAKATAKKAPARKTSARK
TTAKKTTARKR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gccgatgccgtagacgccgttctggacgccatcgtccgggcggtcgtctccggggagcga
gtttcggtcactggattcggttcgttcgagaaggtggagcgacccgcccggtacgcccgt
aacccccagaccggggagcgcgtgcgggtcaagaagacctcggtgccccgcttccgtccc
ggtcagggcttcaaggatctggtgagcggctccaagaagctcccgcgcggcggcgaggtc
gccgtgaagaaggcccccaagggcagtctccaggtggcggcgaagaaggccgcggccaag
aaggcgaccgccaagaaggctccggcgaagaaggctgccgcgaagaaggcgacggcgaag
aaggcccccgccacgaaggccacggccaagaaggcccccgccaagaagaccacggccaag
aaggcccccgccaaggccaccgcgaagaaggccccggcgcgcaagacgagtgcccgtaag
accaccgcgaagaagaccaccgccaggaagcgctag
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integrated database retrieval system
