Streptomyces rapamycinicus: M271_17660
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Entry
M271_17660 CDS
T02907
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_17660
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_17660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
MarR_2
Sigma70_ECF
MarR
HTH_Crp_2
NirdL-like_HTH
HTH_24
HTH_3
HTH_5
GerE
HTH_AraC
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AGP55093
UniProt:
A0A0A0NG93
LinkDB
All DBs
Position
4501849..4502640
Genome browser
AA seq
263 aa
AA seq
DB search
MDQHEQVHQQHDPQDRSGARAMFAELRQLPEGSTERAELRNNLVRMHLPLVEHLARRFRN
RGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRL
QELRLSLTTATAELSQRHGRAPTVHELAQHLSISEEEVLEGLESANAYSTLSLDVPDTDD
ESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGIS
QMHVSRLLARTLAQLRDKLLVEE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcacgagcaggtgcatcagcagcacgatccgcaggaccggagtggcgcgcgg
gcgatgttcgccgagctgcgacaactgccggagggctccaccgagcgggccgagctgcgc
aacaacctcgttcgtatgcatctgccgctggtggagcacctggcccggcgcttccgcaac
cgcggcgagccgctggacgacctcacccaggtcgccaccatcgggctgatcaagtccgtg
gaccggttcgatccggaccgcggtgtggagttctccacctatgcgacaccaacggtcgtg
ggcgagatcaagcgccacttccgtgacaagggctgggcggtgcgggtgccgcgccggctt
caggagctgcggctgtccctgaccacggccaccgcggagctctcccagcgccatggccgc
gccccgaccgtccatgagctggcccagcatctgtccatctccgaggaggaggtgctggag
gggctggagtccgccaatgcctacagcaccctgtccctggacgtcccggacacggacgac
gagtccccggcggtcgccgacaccctcggcgcggaggacgaggcgctcgagggcgtcgag
taccgcgagtccctcaaacccctgttggaggatctgccaccgcgcgagaagaagatcctg
ctgctgcgcttcttcggcaatatgacgcagtcgcagatcgcgcaggaggtcggcatctcc
cagatgcatgtctcccggctgctggcccgcacgctcgcgcagctgcgcgacaagctgctg
gtcgaggagtag
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integrated database retrieval system
