Streptomyces rapamycinicus: M271_17980
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Entry
M271_17980 CDS
T02907
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
src
Streptomyces rapamycinicus
Pathway
src03420
Nucleotide excision repair
src03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M271_17980
03430 Mismatch repair
M271_17980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_17980
Enzymes [BR:
src01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M271_17980
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M271_17980
MMR (mismatch excision repair)
Other MMR factors
M271_17980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Babuvirus_MP
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-ProteinID:
AGP55154
LinkDB
All DBs
Position
complement(4569543..4571753)
Genome browser
AA seq
736 aa
AA seq
DB search
MLDGLDPEQREVATSLHGPVCVLAGAGTGKTRAITHRIAYGVRAGMLQPASVLAVTFTNR
AAGEMRGRLRQLGAGGVQARTFHSAALRQLQYFWPKAVGGEVPRLVERKVQLVAEAAARC
RVRLDRNELRDVTGEIEWSKVTQTVPEDYPAVAAKSGREAPRDAAEIGRIYATYEQLKRD
RGVIDFEDVLLLTVGVLQERPDIADQVRRQYQHFVVDEYQDVSPLQQRLLDLWLGERDSL
CVVGDASQTIYSFTGATPDHLLNFRTRHPRATVVKLIRDYRSTPQVVHLANGLLSQARGR
AAEHRLELVSQRETGPDPAYAAYADEPAEAEGTARRIRELITPVERGGAGVPASQIAVLY
RVNAQSELYEQALADAQVPYQLRGAERFFERPEVREAGLLLRGAARGGSADPELADADIP
SQVRAVLGTRGWTPEPPSGSGAVRDRWESLAALVRLAEDFAASRPAATLSDLVAELDERA
AAQHAPTVEGVTLASLHAAKGLEWDAVFLVGLTEGMMPITYAKTEQQIEEERRLLYVGVT
RARRHLTLSWALSRAPGGRASRRPTRFLNGLRPGSQAVPARTPGGGGGIERGAAASGGGG
GVRKRRGPVHCRVCGRALTDAGEMKLMRCEGCPSELDEALYERLRDWRAEQAGLLGQPAY
CVFTDKTLLAIAEAVPGTEPELVRISGVGRRKLDRFGADVLALCAGRELPSALDGEGDGD
AGGSHSGDPWQNSTEK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgggctcgaccccgagcagcgcgaggtggcgacgtccctgcacggcccggtg
tgcgtgctggccggcgccggcaccggcaagacccgcgccatcacccaccggatcgcctat
ggggtgcgcgcggggatgctccagccggccagtgtgctggccgtcaccttcaccaaccgc
gcggcgggggagatgcgcggccggctgcggcagctcggcgcgggcggggtgcaggcgcgc
accttccactcggcggcccttcgccagctgcagtacttctggcccaaggcggtcggcggt
gaggtgccgcggctggtcgagcgcaaggtgcagctcgtggccgaggccgccgcccggtgc
cgggtccggctggaccgcaatgagctgcgggacgtgaccggcgagatcgaatggtcgaag
gtcacccagaccgtgcccgaggactatccggccgtggccgccaagtccggccgggaagcc
ccccgggacgccgccgagatcggccggatctacgccacctatgagcagttgaagcgcgac
cgcggcgtcatcgacttcgaggatgtgctgctgctcacggtcggtgtgctccaggagcgg
ccggacatcgccgatcaggtgcgccgtcagtaccagcacttcgtggtcgacgagtaccag
gacgtcagcccgctgcagcagcggctgctggatctgtggctgggcgagcgggacagcctc
tgcgtggtcggcgacgccagccagaccatctactccttcaccggcgccacccccgaccat
ctgctgaacttccgcacccgccacccgcgggccaccgtggtcaagctgatcagggactac
cgctcgaccccccaggtggtccacctggccaacgggctgctgtcccaggcccgcggccgg
gccgccgagcaccggctggagctggtctcccagcgggagacgggccccgacccggcctac
gccgcctatgcggacgagccggccgaggccgagggcaccgcccgccggatccgggagctg
atcaccccggtcgagcggggtggcgccggtgtcccggcgagccagatcgcggtcctgtac
cgggtcaacgcccagtcggagctctacgaacaggcgctggccgatgcccaggtgccctat
cagctgcgcggtgccgagcggttcttcgagcggcccgaggtgcgcgaggcggggctgctg
ctgcgcggcgcggcccgtggcggaagcgccgacccggagctggcggacgccgacatcccg
tcccaggtgcgggccgtgctgggcacccgtggctggacacccgagcccccctcgggctcg
ggtgcggtgcgcgaccgctgggagtccctggccgccctggtgcggctcgccgaggacttc
gcggcgagccgccccgcggccacgctctccgatctggtggcggagctcgatgagcgggcg
gcggcgcagcacgccccgaccgtcgagggtgtgaccctcgcctcactccacgcggccaag
ggcctcgaatgggacgccgtcttcctggtcggcctcaccgagggaatgatgccgatcacc
tacgccaagacggagcagcagatcgaggaggagcgccggctgctctatgtgggggtcacc
cgcgcccgccgccatctgacgctttcctgggcgctctcgcgggctccgggcggccgggcc
tcccgtcggcccacccgctttctcaacgggctgcggcccggctcccaggccgtccccgcc
cgcaccccgggcgggggcggcgggatcgagcgcggggcggcggcttcgggcggaggcggc
ggggtgcgcaagcggcgcggcccggtccactgccgggtgtgcggccgggcgctgaccgac
gcgggcgagatgaagctgatgcgctgcgagggctgcccgtccgagctggacgaggcgctc
tatgagcggctgcgcgactggcgggcggagcaggcgggcctgctggggcagccggcgtac
tgcgtgttcaccgacaagacactgctcgcgatcgccgaggccgttccgggaaccgaaccg
gagctcgtccgcatctccggtgtcggaaggcgcaagctggaccggttcggggccgatgtt
ctcgcgctgtgcgcgggccgggaactgccctccgcactcgacggtgagggcgacggcgat
gccgggggaagccattcgggtgacccttggcaaaactcgacggaaaaatag
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