Streptomyces rapamycinicus: M271_21340
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Entry
M271_21340 CDS
T02907
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
src
Streptomyces rapamycinicus
Pathway
src03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M271_21340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_21340
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_21340
Enzymes [BR:
src01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M271_21340
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M271_21340
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M271_21340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AGP55809
UniProt:
A0A0A0NFP3
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All DBs
Position
complement(5338727..5339749)
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggaaactccctgcgtcgt
acgctcctctcctcgatccccggtgcggccgtgaccagcatccggatcgacggggtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgcgccgccggccggtgtcgaggtgcacaac
cccgacctggtcctggctacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctatgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcggccgcgtgacgccatggcgtcggccggtaagaccctggtcgagctgttcggc
ctggcccgcgagctgaacgtggacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctcgccgccgatctggcgctgccgatcgaggagctcgagctcaccgtccgttcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggcgcggtccgag
gcggacctgctcgacatccggaacttcggcgccaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggcgctcaaggacagcccgcccggattcgacccgaccgccgcg
gcggacgcgttcggcgcggacgacgacgcggacgccggtttcgtggagaccgagcagtac
tag
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