Streptomyces rapamycinicus: M271_25940
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Entry
M271_25940 CDS
T02907
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_25940
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_25940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
HTH_3
Sigma70_ECF
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AGP56671
UniProt:
A0A0A0NHG4
LinkDB
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Position
complement(6390602..6391432)
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AA seq
276 aa
AA seq
DB search
MSVELGSSKVLNNDAPLMPDDCDAIDTRTLSRSLFLRLATLDKDSAEAGYVRDTLIELNL
PLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFR
DTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTVTELATALGVSEEDVVDGLAVGNAY
TASSLDSPSPEDDGGEGSLADRLGYEDSALEGVEYRESLKPLLAKLPPRERQIIMLRFFA
NMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagaactgggcagctcgaaggtgctcaacaacgacgcaccgctcatgcctgac
gactgcgacgccatcgacacccgcaccctctcccgctccctcttcctgcggctcgccaca
ctcgacaaggacagtgcggaagccggctatgtccgtgacaccctcatcgagctgaacctc
ccgctcgtccgttacgccgcggcccggttccgcagccgtaacgagccgatggaggacatc
gtccaggtcggcaccatcggcctgatcaaggcgatcgaccgcttcgactgcgaacgcggc
gtggagttcccgacgttcgccatgccgaccgtcgtgggcgagatcaagcggttcttccgc
gacaccagttggtcggtgcgggtcccgcggcggctccaggagctgcgcctggccctcacc
aaggccagtgacgagctgtcacagaagctcgaccgctccccgaccgtcaccgagctcgcc
acggcgctgggcgtctccgaggaggacgtggtcgacgggctcgcggtgggcaatgcctac
acggccagctcgctggactccccgtcccccgaggacgacggcggcgaggggtcgctcgcc
gaccggctggggtacgaggacagcgcgctggagggcgtggagtaccgcgagtcgctcaag
cccctgctggccaaactgccgccgcgggagcgccagatcatcatgctgcgcttcttcgcc
aatatgacgcagtcgcaaatcggcgaagaggtcgggatctcccagatgcacgtctcccgg
ctgctcacccggaccctggcccagctgcgcgagggcctgatctcggactga
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