Streptomyces rapamycinicus: M271_26875
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Entry
M271_26875 CDS
T02907
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_26875
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_26875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
DUF7343
MarR_2
KORA
Sigma70_ECF
MarR
HTH_10
DUF937
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AGP56845
LinkDB
All DBs
Position
6582017..6582853
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AA seq
278 aa
AA seq
DB search
MNGVETAGPVDLPTVDDPAKVAPKDARALTKTFLDRLTELEEGTHEYQYVRNTLIELNLS
LVRYAARRFHNRSVEMEDIVQVGTIGLIKAIDRFDLSREVEFTTFAVPYIVGEIKRFFRD
TSWAVHVPRRLQELRIDLAKANEELFQRLDRSPTTAELAEHLRLSEDEVVDGLVASNGYL
TTSLDAPADQEGGAARVTTYADRFGDVDPAMEAVENLHALKPLVEQLGERDRRILQMRFG
EEMTQSEIGTELGVSQMHVSRLLSRALGRLRRGMLTEG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggagttgagaccgccggccccgtcgatctgcccacggttgacgatccggcgaag
gtggcgcccaaggacgcgcgggcgctgaccaagacgttcctggatcggctgacggagctg
gaggaggggacgcacgagtaccagtacgtgcggaacaccctcatcgagctcaatctgtcg
ctggtccggtacgccgcccggcggttccacaaccgctcggtggagatggaggacatcgtc
caggtcggcaccattgggctgatcaaggcgatcgaccggttcgacctgagccgtgaggtg
gagttcacgaccttcgcggttccgtacatcgtcggcgagatcaagcggttcttccgcgac
accagctgggcggtgcatgtcccccgccggctccaggagttgcggatcgacctcgccaag
gcgaacgaggagctgttccagcggctggaccggtcgcccaccacggccgagctcgcggag
catctgcggctgagcgaggacgaggtcgtcgacggactggtggccagcaacggctatctc
accacctcgctggacgcgcccgcggaccaggagggcggcgccgcgcgcgtgaccacgtac
gcggaccggttcggcgacgtcgacccggccatggaggccgtggagaacctgcacgcactc
aagccgctggtggagcagctcggtgagcgggaccggcgcattctgcagatgcggttcggc
gaggaaatgacgcagtcggagatcggcacggagctcggcgtctcccagatgcatgtctcc
cggctgctcagccgtgcgctcggccgactgcggcgcgggatgctcaccgaggggtag
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