Streptomyces rapamycinicus: M271_27945
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Entry
M271_27945 CDS
T02907
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
src
Streptomyces rapamycinicus
Pathway
src03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M271_27945
09124 Replication and repair
03420 Nucleotide excision repair
M271_27945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_27945
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_27945
Enzymes [BR:
src01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M271_27945
Transcription machinery [BR:
src03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M271_27945
DNA repair and recombination proteins [BR:
src03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M271_27945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
IMD
DUF447_C
Motif
Other DBs
NCBI-ProteinID:
AGP57052
UniProt:
A0A0A0NC67
LinkDB
All DBs
Position
complement(6851138..6852787)
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AA seq
549 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHEQAGACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVAYSRYPVPHALLVDVAETMARYGRLRLLKHPTHGLVLETSDRPILEEILR
SKKIQPLVGARIDPETVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELCEDGWA
LRPYQTQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMATAKSTTLILVTNTVSARQWKHEL
VRRTSLTEEEIGEYSGTRKQIRPITIATYQVLTTKRKGIYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTETERLAYATAETDEKYRYCATTDSKRRITEALVARHKGQQTLVIGQYIDQ
LDELGEHLDAPVIKGETTNAQREKLFDAFRQGELSVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHPAVFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVDA
SELLADEDV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtgaatggacccctcatcgtccaaagcgacaagacgctcctgctcgaagtggatcacgag
caggcgggcgcctgccgccgcgccatcgcgcccttcgccgagctggagcgagcgcccgag
cacatccacacctaccgggtgaccccgctcgggctgtggaacgcccgcgccgccgggcac
gacgccgagcaggtcgtggacgccctcgtcgcgtactctcgctaccccgtcccgcacgcc
ctcctcgtggacgtcgcggagaccatggcccgctacgggcggctgcggctgctcaagcac
cccacccacgggctggtcctggagaccagcgaccgcccgatcctcgaggagatcctgcgg
tcgaagaagatccagccgctggtcggggcccggatcgacccggagaccgtcgtcgtccac
ccctccgagcgcggccagatcaagcagacgctgctgaagctgggctggcccgccgaggat
ctggccggctatgtggacggcgaggcgcaccccatcgagctgtgtgaggacggctgggcg
ctgcggccgtatcagacgcaggccgtggagggcttctggcacggtggctcgggcgtcgtc
gtgctgccctgcggcgccggaaagacgctggtcggcgcgggtgcgatggccaccgccaag
tcgaccacgctgatcctggtcaccaacaccgtctccgcccgccagtggaagcacgagctg
gtgcgccgcacctcgctcaccgaggaggagatcggtgagtacagcggtacgcggaagcag
atccgcccgatcaccatcgccacgtaccaggtgctcaccaccaagcggaagggcatctac
ccgcacctcgagctgttcgactcccgcgactggggcctgatcgtctacgacgaggtgcat
ctgctcccggcgcccgtcttcaagttcaccgccgatctccaggcgcggcggcggctcggg
ctcacggcgacgctcgtccgggaggacggccgggagtccgatgtcttctccctcatcggg
ccgaagcgcttcgacgccccctggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgtgtcgaggtccgggtcaacctgaccgagaccgagcggctggcgtacgcgaccgcc
gagaccgacgagaagtaccgctactgcgccacgaccgactccaagcggcggatcaccgag
gcgctggtcgcccggcacaaggggcagcagacgctggtcatcgggcagtacatcgaccag
ctcgacgagttgggcgagcacctggacgcgcccgtcatcaagggcgagaccaccaacgcc
cagcgggagaagctcttcgacgccttccggcagggcgagctgtcggtactcgtcgtctcg
aaggtcgccaacttctccatcgacctccccgaggccacggtcgccatccaggtctccggc
accttcggctcccgtcaggaggaggcccagcggctcggccgggtgctgcgcccgaaggcc
gacggccacccggcggtcttctactcggtggtcgcgcgcgacacgatcgaccaggacttc
gcggcacaccgccagcggttcctggccgagcaggggtacgcgtaccggatcgtggacgcg
agcgagctgctcgcggacgaggacgtctga
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