Streptomyces rapamycinicus: M271_28375
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Entry
M271_28375 CDS
T02907
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
src
Streptomyces rapamycinicus
Pathway
src03420
Nucleotide excision repair
src03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M271_28375
03430 Mismatch repair
M271_28375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_28375
Enzymes [BR:
src01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M271_28375
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M271_28375
MMR (mismatch excision repair)
Other MMR factors
M271_28375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AGP57135
UniProt:
A0A0A0NRF6
LinkDB
All DBs
Position
6962629..6965103
Genome browser
AA seq
824 aa
AA seq
DB search
MSSLFDDSFLADLGPSPDEERPPPPEDSAHPGHGGAEDVPHHLFSGDFEAPVPREAHYRD
GAARPAVDPSALLEGLNEQQRAAVEHTGSPLLIVAGAGSGKTRVLTHRIAYLLGARSTHP
GQILAITFTNKAAGEMKERVEELVGPRANAMWVSTFHSACVRILRRESKKLGFTSSFSIY
DAADSKRLMSLVCRDLDLDPKRFPSKSFSAKISNLKNELIDEETFAGQATEGFEKTLAEA
YVMYQARLREANALDFDDIIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLV
RELVGTDTEETTAAELCVVGDADQSIYAFRGATIRNILQFEEDYPTARTILLEQNYRSTQ
TILSAANAVIERNENRRPKNLWTDAGAGAEIIGYVADTEHDEAQFVADEIDRLTDAGDAK
AGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDSVP
LRRILNVPKRGIGERAEAMIDALSLREKITFPQALRRVDEAYGMAARSANAVKRFNTLME
ELHTIVESGSGPATVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQDRGE
ENPGTLADFLEQVALVADSDQIPDEDTEGSGVITLMTLHTAKGLEFPVVFLSGMEDGVFP
HMRALGQTKELEEERRLAYVGITRARERLYLTRSTMRSAWGQPAYNPPSRFLEEIPDQYV
RWRRTGPATPSASMGGIASTPSSGLSSGLSTSRSRTGGSGFATRRAKERPVVALAIGDRV
THDSFGLGTVVAVKGSGDNAEATIDFGDEKPKRLLLRYAPVEKL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctcgggccttctccggacgaggag
cggccaccgccgcccgaggattcggcgcaccctggccacggtggcgccgaggacgtgccg
catcacctcttcagcggcgatttcgaagcgcccgtgccgcgggaggcccactaccgggac
ggcgcggcccggcccgccgtggacccgtccgccctgctcgaggggttgaacgagcagcag
agggccgccgtggagcacaccggctcgccgctgctgatcgtcgcgggcgccggctccggc
aagacccgggtgctcacccaccgcatcgcctatctgctcggcgcccgctccacccacccc
ggccagatcctcgccatcaccttcaccaacaaggcggcgggcgagatgaaggagcgcgtc
gaggagctcgtcggcccgcgggccaacgccatgtgggtgtccaccttccacagcgcctgc
gtccgcatcctgcgccgggagtcgaagaagctgggcttcacctcgtcgttctcgatctac
gacgcggccgactccaagcggctgatgtcgctggtctgccgggacctggatctcgacccc
aagcggttcccgtcgaagtccttcagcgccaagatctccaacctcaagaacgagctgatc
gacgaggagaccttcgccgggcaggctacggaaggttttgagaagacgctggccgaggcg
tatgtgatgtaccaggcgcggctgcgcgaggccaacgcgctggatttcgacgacatcatc
atgaccacggtcaatctgctccaggcgttcccggacgtcgccgagcactaccgccgccgc
ttccggcacgtcctggtggacgagtaccaggacaccaaccacgcgcagtacacactcgtg
cgcgagctggtgggcaccgacaccgaggagaccactgccgccgagctgtgcgtggtgggc
gacgccgaccagtcgatctacgccttccggggcgccacgatccgtaacatcctccagttc
gaggaggactaccccaccgcgcggacgatcctcctcgagcagaactaccgctcgacccag
accatcctgagcgcggccaacgcggtcatcgagcgcaatgagaaccgccgccccaagaac
ctgtggacggacgccggcgccggggccgagatcatcggctatgtggccgacaccgagcac
gacgaggcccagttcgtcgccgacgagatcgaccggctgacggacgcgggcgacgccaag
gccggggacgtggcggtcttctaccgcaccaacgcccagtcccgtgtcttcgaagaggtc
ttcatccgcgtcgggctgccgtacaaggtcgtcggcggcgtgcgcttctacgagcgcaag
gaggtccgggacgtcctcgcgtatctgcgggtgctggccaaccccgaggactccgtcccg
ctccgccggatcctgaacgtgcccaagcgcggcatcggggagcgcgcggaggccatgatc
gacgcgctgtcgctgcgcgagaagatcaccttcccgcaggcgctgcgccgggtcgacgag
gcgtacggcatggcggcccgctcggccaacgccgtcaagcggttcaacacgctcatggag
gagctgcacaccatcgtggagtccgggtcgggcccggccaccgtcctggaggcggtgctg
gagcgcaccggctatctggccgagctccaggcgtccaccgatccgcaggacgagacccgg
atcgagaaccttcaggagctcgccgccgtggccctcgagttcgagcaggaccgaggcgag
gagaaccccggcaccctcgcggacttcctggagcaggtcgcgctcgtcgccgactccgac
cagatccccgacgaggacaccgaggggtccggcgtgatcacgctgatgaccctgcacacg
gcgaagggcctggagttcccggtcgtcttcctcagcggcatggaggacggcgtgttcccg
cacatgcgggcgctcggccagaccaaggagctggaggaggagcggcggctggcctatgtc
gggatcacccgggcccgcgagcggctctatctgacccgctcgacgatgcgcagcgcctgg
ggacagcccgcgtacaacccgccgtcccgcttcctggaggagatcccggaccagtatgtg
cgctggcggcgcaccgggcccgccaccccgtccgcgtccatgggcggcatcgcctcgacc
ccgtcgtcggggctgtcgtccggtctgtcgacgtcgcgttcgcgcaccggaggcagcggg
ttcgccacccggcgggccaaggagcgcccggtggtcgccctggccatcggtgaccgggtc
acccatgactcgttcgggctcggcacggtggtggcggtcaagggcagcggggacaacgcg
gaggcgacgatcgacttcggcgacgagaagccgaagcggctgctgctgcggtacgcaccg
gtggagaagctgtag
DBGET
integrated database retrieval system
