Streptomyces rapamycinicus: M271_33080
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Entry
M271_33080 CDS
T02907
Name
(GenBank) RNA polymerase sigma70
KO
K03086
RNA polymerase primary sigma factor
Organism
src
Streptomyces rapamycinicus
Pathway
src02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
src00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
M271_33080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_33080
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_33080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
AGP58034
UniProt:
A0A0A0NM49
LinkDB
All DBs
Position
8175442..8176710
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AA seq
422 aa
AA seq
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MQTQTLTDAALAARPLSPHSSRATAVAPAMPEDSADLAPEGVPDTGQDAAPGPTAELAPD
TAPAPAPDGAAPEAEPAEPTEPTESAEPAESAEPADPVEAVEPVEPVEPIEPPARADTSG
PSADLFRQYLREIGRIPLLSAVEEVELARRVEAGLFAEEKLGNTPDLDSQLALDLDRLVV
LGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTY
ATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAAHLDLL
PERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLLREHLEAVLST
LGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGY
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacccagaccctcaccgacgcggccctcgcggcgcgccccctgtccccccactcg
tcccgcgccacggcggtagcgccggccatgcccgaggactcggcggacctcgccccggaa
ggcgtaccggataccggccaggacgccgcaccgggccccacggccgagctcgcccccgac
accgccccggcccccgcgcccgacggcgccgcccccgaagcggaacccgcagagcccaca
gagcccaccgagtccgcagagcccgctgagtccgccgagcctgccgacccggtcgaggcc
gtggagcccgtcgagcccgtcgaaccgatcgagccgcccgcccgcgccgacaccagcggc
ccctccgccgacctcttccgccagtacctccgcgagatcgggcggataccgctgctctcc
gcggtcgaggaggtcgagctggcccgccgggtcgaggcgggcctcttcgccgaggagaag
ctcggcaacacccccgacctcgactcccaactcgccctggacctggaccggttggtggtc
ctgggccggatggccaagcgccggctgatcgaggccaacctccgcctcgtcgtctccgtc
gccaagcgctacgtcggccgcggtctgaccatgctggacctggtccaggagggcaacctc
ggcctgatccgcgcggtcgagaagttcgactacgcccgcggctacaagttctcgacgtac
gcgacctggtggatccgccaggccatgtcccgcgccctggccgaccaggcccggacgatc
cgggtcccggtgcatgtcgtcgagctgatcaaccgggtggtccgggtccagcgccggatg
ctccaggagcgcggctacgaacccacccccgaggaggtcgccgcccatctcgacctgctc
ccggagcgggtgagcgaggtgctgcggctggcccaggagccggtgtcgctccacgcgccg
gtgggcgaggaggacgatgtcgccctcggcgacctcatcgaggacggcgacgcggcgtcc
cccgtggagtccgcggccttcctgctgctccgcgagcatctggaggccgtgctgtcgacg
ctcggcgagcgcgaacgcaaggtggtgcagctgcggtacggactggcggacggccgcccc
cgcacgctggaggagatcggccggatcttcggggtgacgcgggagcggatccgccagatc
gagtcgaagacgctcaacaagctccgcgaccacgccttcgccgatcagctgcgcggctat
ctggactag
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