KEGG   Streptomyces rapamycinicus: M271_33080
Entry
M271_33080        CDS       T02907                                 
Name
(GenBank) RNA polymerase sigma70
  KO
K03086  RNA polymerase primary sigma factor
Organism
src  Streptomyces rapamycinicus
Pathway
src02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:src00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    M271_33080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:src03021]
    M271_33080
Transcription machinery [BR:src03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     M271_33080
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_28 KORA
Other DBs
NCBI-ProteinID: AGP58034
UniProt: A0A0A0NM49
LinkDB
Position
8175442..8176710
AA seq 422 aa
MQTQTLTDAALAARPLSPHSSRATAVAPAMPEDSADLAPEGVPDTGQDAAPGPTAELAPD
TAPAPAPDGAAPEAEPAEPTEPTESAEPAESAEPADPVEAVEPVEPVEPIEPPARADTSG
PSADLFRQYLREIGRIPLLSAVEEVELARRVEAGLFAEEKLGNTPDLDSQLALDLDRLVV
LGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTY
ATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAAHLDLL
PERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVESAAFLLLREHLEAVLST
LGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGY
LD
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgcagacccagaccctcaccgacgcggccctcgcggcgcgccccctgtccccccactcg
tcccgcgccacggcggtagcgccggccatgcccgaggactcggcggacctcgccccggaa
ggcgtaccggataccggccaggacgccgcaccgggccccacggccgagctcgcccccgac
accgccccggcccccgcgcccgacggcgccgcccccgaagcggaacccgcagagcccaca
gagcccaccgagtccgcagagcccgctgagtccgccgagcctgccgacccggtcgaggcc
gtggagcccgtcgagcccgtcgaaccgatcgagccgcccgcccgcgccgacaccagcggc
ccctccgccgacctcttccgccagtacctccgcgagatcgggcggataccgctgctctcc
gcggtcgaggaggtcgagctggcccgccgggtcgaggcgggcctcttcgccgaggagaag
ctcggcaacacccccgacctcgactcccaactcgccctggacctggaccggttggtggtc
ctgggccggatggccaagcgccggctgatcgaggccaacctccgcctcgtcgtctccgtc
gccaagcgctacgtcggccgcggtctgaccatgctggacctggtccaggagggcaacctc
ggcctgatccgcgcggtcgagaagttcgactacgcccgcggctacaagttctcgacgtac
gcgacctggtggatccgccaggccatgtcccgcgccctggccgaccaggcccggacgatc
cgggtcccggtgcatgtcgtcgagctgatcaaccgggtggtccgggtccagcgccggatg
ctccaggagcgcggctacgaacccacccccgaggaggtcgccgcccatctcgacctgctc
ccggagcgggtgagcgaggtgctgcggctggcccaggagccggtgtcgctccacgcgccg
gtgggcgaggaggacgatgtcgccctcggcgacctcatcgaggacggcgacgcggcgtcc
cccgtggagtccgcggccttcctgctgctccgcgagcatctggaggccgtgctgtcgacg
ctcggcgagcgcgaacgcaaggtggtgcagctgcggtacggactggcggacggccgcccc
cgcacgctggaggagatcggccggatcttcggggtgacgcgggagcggatccgccagatc
gagtcgaagacgctcaacaagctccgcgaccacgccttcgccgatcagctgcgcggctat
ctggactag

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