Streptomyces rapamycinicus: M271_33250
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Entry
M271_33250 CDS
T02907
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
src
Streptomyces rapamycinicus
Pathway
src00040
Pentose and glucuronate interconversions
src01100
Metabolic pathways
src02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
src00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
M271_33250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M271_33250
Enzymes [BR:
src01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
M271_33250
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF5865
Motif
Other DBs
NCBI-ProteinID:
AGP58065
UniProt:
A0A0A0NTL2
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Position
8207273..8208391
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AA seq
372 aa
AA seq
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MRSTHDHGTTHDHGTTDGDDVIDVNRVTARDRRRLTAVAAGVTAALALGGLSTVSAHGAD
SADSARSGTTHTTAARSGNALPAAETTPIGFGAGTTGGGNATATTVTSLDAFKSAVTGDQ
AKVVKVSGLISLTGQVDLGSNTTVLGVGSGSGFTGGGLRLKESTNVIVRNLDISKPRKPS
DGITVQKSTKVWIDHNTFSADRDHDKDYYDGLLDINHGSDNITVSWNKFADHFKGSLVGH
SDNNAAEDTGHLKVTYHHNWFSDVYSRIPSLRFGTGHFYDNYVQGAETGVHSRMGAQTLV
ENNVFRDTEVAVTTSRDSDVDGYAVLRGNDLGGAATEVSRTGSFTTPPYAYTAEPASSVV
ATVTAQAGAGKL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgacgcacgaccacggcaccacgcacgaccacggcaccacggacggcgacgat
gtcattgacgtcaaccgcgtcaccgcccgcgaccgacgccggctgaccgcggtcgccgcg
ggcgtcaccgcggcgctcgccctcggcggcctctccacggtctccgcccatggcgcggac
tcggccgactccgcacgctccggcaccacgcacaccaccgccgcacgctccggaaacgca
ctccccgccgccgagaccacccccatcggcttcggcgccggcaccacgggcggcgggaac
gccaccgccaccaccgtgacctccctggacgccttcaagtccgccgtcaccggcgaccag
gccaaggtggtcaaggtctccgggctgatctccctcaccggccaggtggacctcggctcc
aacaccaccgtgctgggcgtgggttcgggctccggtttcaccggcggcggactgcggctg
aaggagtcgacgaacgtcatcgtccgcaacctcgacatcagcaagccccggaagccgtcc
gacggcatcaccgtgcagaagtccaccaaggtgtggatcgaccacaacaccttctcggcc
gaccgcgaccacgacaaggactactacgacggcctgctggacatcaaccacggctcggac
aacatcaccgtctcctggaacaagttcgccgaccacttcaagggcagcctggtcggccac
agcgacaacaacgcggccgaggacaccggccacctcaaggtgacgtaccaccacaactgg
ttctcagacgtctactcccgcatccccagcctgcgcttcggcaccggccacttctacgac
aactacgtgcagggcgcggagaccggtgtgcactcccggatgggcgcgcagacgctggtc
gagaacaacgtcttccgcgacaccgaagtggccgtcaccaccagccgggacagcgatgtc
gacggctatgcggtgctgcgcggcaacgacctgggcggggcggccaccgaggtctcccgg
acgggcagcttcaccaccccgccgtacgcgtacacggcggaaccggcgtcctcggtcgtg
gccaccgtcaccgcccaggcgggcgcgggaaagctctga
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