KEGG   Streptomyces rapamycinicus: M271_33250
Entry
M271_33250        CDS       T02907                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
src  Streptomyces rapamycinicus
Pathway
src00040  Pentose and glucuronate interconversions
src01100  Metabolic pathways
src02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:src00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    M271_33250
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    M271_33250
Enzymes [BR:src01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     M271_33250
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD DUF5865
Other DBs
NCBI-ProteinID: AGP58065
UniProt: A0A0A0NTL2
LinkDB
Position
8207273..8208391
AA seq 372 aa
MRSTHDHGTTHDHGTTDGDDVIDVNRVTARDRRRLTAVAAGVTAALALGGLSTVSAHGAD
SADSARSGTTHTTAARSGNALPAAETTPIGFGAGTTGGGNATATTVTSLDAFKSAVTGDQ
AKVVKVSGLISLTGQVDLGSNTTVLGVGSGSGFTGGGLRLKESTNVIVRNLDISKPRKPS
DGITVQKSTKVWIDHNTFSADRDHDKDYYDGLLDINHGSDNITVSWNKFADHFKGSLVGH
SDNNAAEDTGHLKVTYHHNWFSDVYSRIPSLRFGTGHFYDNYVQGAETGVHSRMGAQTLV
ENNVFRDTEVAVTTSRDSDVDGYAVLRGNDLGGAATEVSRTGSFTTPPYAYTAEPASSVV
ATVTAQAGAGKL
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgcgctcgacgcacgaccacggcaccacgcacgaccacggcaccacggacggcgacgat
gtcattgacgtcaaccgcgtcaccgcccgcgaccgacgccggctgaccgcggtcgccgcg
ggcgtcaccgcggcgctcgccctcggcggcctctccacggtctccgcccatggcgcggac
tcggccgactccgcacgctccggcaccacgcacaccaccgccgcacgctccggaaacgca
ctccccgccgccgagaccacccccatcggcttcggcgccggcaccacgggcggcgggaac
gccaccgccaccaccgtgacctccctggacgccttcaagtccgccgtcaccggcgaccag
gccaaggtggtcaaggtctccgggctgatctccctcaccggccaggtggacctcggctcc
aacaccaccgtgctgggcgtgggttcgggctccggtttcaccggcggcggactgcggctg
aaggagtcgacgaacgtcatcgtccgcaacctcgacatcagcaagccccggaagccgtcc
gacggcatcaccgtgcagaagtccaccaaggtgtggatcgaccacaacaccttctcggcc
gaccgcgaccacgacaaggactactacgacggcctgctggacatcaaccacggctcggac
aacatcaccgtctcctggaacaagttcgccgaccacttcaagggcagcctggtcggccac
agcgacaacaacgcggccgaggacaccggccacctcaaggtgacgtaccaccacaactgg
ttctcagacgtctactcccgcatccccagcctgcgcttcggcaccggccacttctacgac
aactacgtgcagggcgcggagaccggtgtgcactcccggatgggcgcgcagacgctggtc
gagaacaacgtcttccgcgacaccgaagtggccgtcaccaccagccgggacagcgatgtc
gacggctatgcggtgctgcgcggcaacgacctgggcggggcggccaccgaggtctcccgg
acgggcagcttcaccaccccgccgtacgcgtacacggcggaaccggcgtcctcggtcgtg
gccaccgtcaccgcccaggcgggcgcgggaaagctctga

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