Streptomyces rapamycinicus: M271_35790
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Entry
M271_35790 CDS
T02907
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
src
Streptomyces rapamycinicus
Pathway
src03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
src00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M271_35790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
src03400
]
M271_35790
Enzymes [BR:
src01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
M271_35790
DNA repair and recombination proteins [BR:
src03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M271_35790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2749
Motif
Other DBs
NCBI-ProteinID:
AGP58563
UniProt:
A0A0A0NQR7
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All DBs
Position
complement(8779916..8780791)
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AA seq
291 aa
AA seq
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MSTHRIRNPIGGHIRVAGGLATVGLAHAADIGAETVQVFVANPRGWATPAGTPAQDEAFR
AGCAERSVPVYVHAPYLINFGSHTEATAERSVASLRHSLRRGREIGALGVVVHTGSATGG
RPRATAIAQVRERVLPLLDELTRDDDPWLLLEPTAGQGTSLCALVEDLGPYVEALDRHPR
LGVCLDTCHVFAAGHDLAAPGGVKQTLDELVAVAGEGRLRLIHANDSKDVVGAHKDRHAN
IGAGHIGAEPFRELFTHPATDGVPLVIETPGGTEGHATDVARLKELRAGAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacgcatcgcatccgcaaccccatcggtggccatatccgtgtggccggcggcctg
gccaccgtcggtctggcgcacgccgccgacatcggcgccgagaccgtccaggtcttcgtc
gccaatccgcgcggctgggccaccccggccggtacgcccgcccaggacgaggcgttccgc
gccggctgcgccgagcggtcggtaccggtgtacgtccacgccccctacttgatcaacttc
ggttcgcacaccgaggccacggccgaacgctccgttgcgtccctgcgccattcgctccgg
cgcggccgggagatcggcgcgctcggcgtggtcgtccacaccggctcggcgaccggggga
cgtccgcgtgccaccgcgatcgcgcaggtacgggagcgggtgctgccgctgctggacgag
ctgacccgggacgacgacccctggctgttgctggagccgaccgccgggcagggcacctcg
ctgtgcgcgctggtggaggatctgggcccgtatgtcgaggcgctggaccggcatccccgg
ctgggcgtctgcctggacacctgccatgtgttcgcggcgggccatgacctcgccgccccg
ggcggtgtgaagcagacgctggacgagctggtggccgtcgcgggtgaggggcggctcagg
ctgatccacgccaatgactccaaggacgtggtcggcgcccacaaggaccggcacgcgaac
atcggcgccgggcacatcggggcggagccgttccgcgagctgttcacccaccccgcgacc
gacggggtgccgctggtgatcgagacaccgggcggtacggaggggcacgcgacggatgtg
gcccggctgaaggagctgcgcgccggggcggcctga
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