Streptomyces rapamycinicus: M271_38605
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Entry
M271_38605 CDS
T02907
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
src03019
]
M271_38605
Enzymes [BR:
src01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M271_38605
Messenger RNA biogenesis [BR:
src03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M271_38605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND3
nSTAND_NTPase5
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGP59113
UniProt:
A0A0A0NS04
LinkDB
All DBs
Position
9430218..9433040
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AA seq
940 aa
AA seq
DB search
MTDELSPAERYAASRDRAAEQATALAPFREMYDFELDPFQIEACKALESGKGVLVAAPTG
SGKTIVGEFAVHLALTQGRKCFYTTPIKALSNQKYTDLVKRYGADQVGLLTGDNSVNSEA
PVVVMTTEVLRNMLYAGSQSLLGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVLAGRRMYDLFEEKSGQDGDQGGR
REVNPDLVRLARMENSRPSFGRDKRRGRNMREADRERERRQRSRIWTPGRPEVIDRLDAE
GLLPAITFIFSRAGCEAAVQQCLHAGLRLNDESARSQVRAVVEERTAGIPDEDLHVLGYF
EWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHVDITPGEYTQLTGRAGRRGIDVEGHAVVLWQRTMDPAALAGLAGTRTYPLRSS
FKPSYNMAVNLVSQFGRHRSRELLETSFAQFQADKAVVGISRQVQRNEEGLEGYRASMTC
HLGDFDEYARLRRELKDRETELARQGAAQRRAAAAVALEKLRPGDVIHVPTGKFAGLALV
LDPGLPAGRVGGHRGMEYHDGPRPLVLTAERQVKRLASIDFPVPVEPLDRMRIPKSFNPR
SPQSRRDLASALRTKAGHHDMRRHRKERSAAADDTEISRLRAAIRAHPCHGCSDREDHAR
WGERYHRLLRDTRQLERRIEGRTNTIARTFDRICSLLSELGYLRGDEVTDEGRRLARLYG
ELDLLASECLREGVWEGLPPAELAACASALVYEARTADDALPPKLPTGRAKDALGEMVRI
WGRLDALEEQHKINQAEGVGQREPDLGFAWAAYRWASGHGLDEVLREIDVPAGDFVRWTK
QLIDVLGQIAAAAPEGTVARSARRAVDGLLRGVVAYSSVG
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagctatctcccgccgagcgctatgcggcgtcccgcgaccgggccgccgag
caggccaccgcgctggcccccttccgcgagatgtacgacttcgagctggacccgttccag
atcgaggcgtgcaaggccctggagagcggcaagggtgtgctggtcgccgctcccaccggc
tcgggcaagaccatcgtgggcgagttcgccgtccacctggcgctgacccagggccgcaag
tgcttctacaccacgcccatcaaggcgctgtcgaaccagaagtacaccgacctggtgaag
cgctacggcgccgaccaggtcggcctgctcaccggcgacaacagcgtcaattccgaggca
ccggtggtcgtgatgaccaccgaggtgctgcggaacatgctctatgccggctcccagtcg
ctgctcggcctcggccatgtggtgatggacgaggtccactacctctccgaccggttccgg
ggcgccgtctgggaggaggtcatcatccacctccccgagtcggtgacgctggtgtcactc
tccgcgaccgtctccaacgccgaggagttcggcgactggctggacaccgtccgcggcgac
accgaggtcatcgtctccgagcaccgtccggtgccgttgtggcagcacgtgctggccggg
cgccggatgtacgacctgttcgaggagaagagcggccaggacggcgaccagggcggacgc
cgcgaggtcaaccccgatctggtccggctggcccggatggagaacagccgcccctccttc
ggccgtgacaagcgccgcggccgcaatatgcgcgaggccgaccgggagcgcgagcgccgc
cagcgcagccggatctggacccccggccgccccgaggtgatcgaccggctcgacgccgag
gggctgcttccggccatcaccttcatcttcagccgggccggctgcgaggccgccgtccag
cagtgcctccacgcggggctgcggctcaacgacgagtcggcgcgctcccaggtgcgggcc
gtcgtcgaggagcgcaccgccgggatccccgacgaagacctccatgtgctggggtacttc
gaatggctggagggcctggagcggggcatcgcggcccaccacgccggaatgctccccacc
ttcaaggaagtcgtcgaggagctcttcgtccgcggcctggtcaaggcggtcttcgccacc
gagaccctcgccctcggcatcaacatgcccgcccgctcggtggtgttggagaagctcgtc
aagtggaacggcgagcagcacgtcgacatcacccccggtgagtacacccagttgaccggc
cgcgccgggcggcgcggtatcgacgtcgagggccatgcggtggtgctgtggcagcgcacc
atggaccccgcggcgctcgccgggctggccggcacccgcacgtatccgctgcgctcctcc
ttcaagccgtcgtacaacatggcggtcaacctggtctcccagttcgggcggcaccgctcg
cgcgagctgctggagacctccttcgcgcagttccaggccgacaaggcggtcgtcgggatc
tcccgtcaggtgcagcgcaacgaggagggcctcgagggctaccgcgcctccatgacctgc
cacctcggcgacttcgacgagtacgcgcgactgcgccgcgagctcaaggaccgcgagacc
gaactggcccggcagggcgcggcccagcggcgcgcggccgccgcggtcgccctggagaag
ctccgccccggcgatgtcatccacgtgcccaccggcaagttcgccgggctcgccctggtg
ctggaccccgggctgcccgccgggcgggtgggcggccaccgcggcatggagtaccacgac
gggccgcggcccctggtgctcaccgccgagcggcaggtcaagcggctggcgtcgatcgac
ttcccggtcccggtcgagccgctggaccggatgcggatccccaagtcgttcaatccgcgc
agcccccagtcgcgccgcgacctggcgtccgcgctgcgcaccaaggccggccaccacgat
atgcggcgccaccgcaaggagcgctcagccgccgccgacgacaccgagatcagcaggctg
cgcgcggccatccgcgcccacccctgccacggctgcagcgaccgcgaggaccacgcccgc
tggggcgagcgctaccaccggctgctgcgcgacacccggcagctggagcggcgcatcgag
ggccgtacgaacaccatcgcccgcaccttcgaccggatctgctccctgctgagcgagctc
ggctatctgcgcggcgacgaggtcacggacgagggcagacggctggcgcggctgtacggc
gagctggacctgctggccagcgaatgcctgcgggagggcgtctgggaggggctgcccccc
gccgagctcgcggcctgcgcctccgcgctggtctacgaggcgcggacggccgatgacgcg
ctgccgcccaagctgcccacgggccgggccaaggacgcgctcggcgagatggtgcgcata
tgggggcggctggacgccctggaggagcagcacaagatcaaccaggcggagggcgtcggc
cagcgcgaaccggacctgggcttcgcctgggccgcctaccgctgggcctccggccatggg
ctcgacgaggtgctgcgcgaaatcgacgtgccagccggtgacttcgtgcgctggaccaag
caactgatcgatgtgctcggccagatcgccgcggcggcccccgagggcaccgtggcgcgc
agcgcccgccgtgcggtcgacgggctgctgcgcggagtcgtggcgtactcctcggtcggc
tga
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