Streptomyces rapamycinicus: M271_42015
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Entry
M271_42015 CDS
T02907
Name
(GenBank) hypothetical protein
KO
K03090
RNA polymerase sigma-B factor
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_42015
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_42015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
HTH_3
DUF7343
KORA
HTH_10
MarR_2
HTH_24
MarR
Motif
Other DBs
NCBI-ProteinID:
AGP59779
UniProt:
A0A0A0NRL0
LinkDB
All DBs
Position
complement(10422671..10423492)
Genome browser
AA seq
273 aa
AA seq
DB search
MSAMGTGARRHHDDTPDTAADFERLAAMPKGPEREALAEKLVEAWLPMAHRLARRYRNRG
ENLEDLEQVAALGLVKAVDRYDPQRGGAFQPYAIPTIVGELKRYFRDCAWDLHVPRRVQE
LRNRVRATIQDLTAAEGNDRSPTVAQVAQAADMSEEDVLTGMEAIDSFRSLSLDAELAGA
DDGYSLADTLGRSETRYDTVIARESVKPCLNRLPEREQHILYLRFFRDMTQAGIAEELGI
SQMHVSRLISRSCARIRNQVETEARPDRIPVHA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatgggtaccggcgcccgccgccaccacgacgacactcctgacaccgcggcc
gacttcgaacggctggccgccatgcccaaggggcccgagcgggaggccctggccgagaag
ctggtcgaggcatggctgccgatggcccaccgactcgcccgccgctaccgcaaccgcggg
gagaacctggaggatctggagcaggtcgccgccctgggcctggtcaaggccgtcgaccgt
tacgacccgcaacgcgggggcgccttccagccctacgccatccccacgatcgtcggggaa
ctcaagcggtacttccgcgactgcgcctgggacctccatgtcccccggcgggtgcaggag
ctgcgcaacagggtccgcgccaccatccaggacctcaccgcggccgaaggcaacgaccgc
tcccccaccgtggcccaggtcgcccaggcagccgacatgagcgaagaggacgtcctcacc
gggatggaagccatcgacagcttccggtccctgtccctggacgccgaactcgccggggcg
gacgacggctattccctggccgacaccctcggccggtccgagacccgctacgacaccgtc
atcgcccgggaatcggtcaagccgtgcctgaaccggctcccggagcgggagcagcacatc
ctgtatctgcggttctttcgcgatatgacccaggccggcatcgccgaggagctgggcatc
tcccagatgcacgtctcccgcctcatctcccgcagctgcgccaggatccgcaaccaggtc
gagaccgaggcgcggcccgaccggatcccggtccacgcgtaa
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