Streptomyces rapamycinicus: M271_47655
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Entry
M271_47655 CDS
T02907
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
src03021
]
M271_47655
Transcription machinery [BR:
src03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M271_47655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
MarR_2
HTH_Crp_2
DUF4423
KORA
HTH_24
MOZ_SAS
HTH_3
HTH_1
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AGP60893
UniProt:
A0A0A0NVS3
LinkDB
All DBs
Position
11905429..11906235
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AA seq
268 aa
AA seq
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MTSARAHPRTHPKHAHDDAPDTSADFRRIADLPDGQERETLRQDVVRAWMPMAERIAAQF
RNRGESSEDLRQVAMVGLVKAVKRYEPDRGSAFESYAVPTVVGEVKRHFRDHMWGLHVPR
RVQELRNRVRTAVQELTRSPDDRSPSVKDIARHTGMTEEDVLVGMEALDSFRTLSLDAAL
RGADDGYALVDTLGATESSYERVVQRESLKPCLRRLPEREREILYLRFFCDETQSRIADR
LGISQMHVSRLINRTCAHLGQEVGARAA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgcacgagcacacccccgaacacaccccaagcacgcacacgacgacgccccc
gacacctccgccgacttccgccggatcgccgatctgccggacggtcaggagagggagacc
ctgcgacaggatgtcgtccgggcctggatgccgatggccgagcgcatcgccgcacagttc
cgcaatcgcggtgaaagctccgaggatctgcggcaggtggccatggtcggactggtcaag
gcggtcaagcgctatgagccggaccggggttcggccttcgagagctacgccgtccccacc
gtggtcggagaggtcaagcggcacttccgcgaccacatgtggggcctgcacgtcccgcgc
cgggtccaggagctgcgcaaccgggtccgcaccgccgtgcaggagctgacccgctcaccg
gacgaccgttcgcccagcgtcaaggacatcgcccggcacaccggcatgaccgaggaggac
gtcctcgtcggcatggaggcgctcgacagcttccgcacgctgtcgctggacgccgcactg
cgcggcgccgacgacggctacgcactggtggacaccctcggcgccaccgagtcctcctac
gagcgggtggtccagcgcgaatccctcaagccgtgcctgcgcaggcttcccgagcgggag
cgggagatcctctacctgcgattcttctgcgacgagacccagagccggatcgccgatcgg
ctcggcatctcccagatgcatgtctcccggctcatcaaccgcacctgcgcccacctgggc
caggaggtcggcgcccgtgccgcgtga
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