KEGG   Spirosoma radiotolerans: SD10_01920
Entry
SD10_01920        CDS       T03819                                 
Name
(GenBank) RNAse Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
srd  Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:srd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srd03016]
    SD10_01920
Enzymes [BR:srd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     SD10_01920
Transfer RNA biogenesis [BR:srd03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SD10_01920
 Prokaryotic type
    SD10_01920
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B HNH_repeat
Other DBs
NCBI-ProteinID: AKD53846
UniProt: A0A0E3V5Q5
LinkDB
Position
488643..489521
AA seq 292 aa
MILTITGYSTALFSTWYFVEELRLLLDAGDGIAPTLLQKSRKIDHIFLSHADRDHVTGLL
RLNELNARDGFPTVYYPADAGSIAALETFSKQFDGRVKKTVWHPIGDQQHVQLRKNLFVQ
SARNNHVVKAQPHEIKSLGYQIYETKTKLKSDFVNLSGEALRQLAEKFGRQTLTDEVRTN
LLAYSGDTPAENFDQWNNTQTLIHEATFLTRAEFATLETNRNQHSTLEDVLAAVADLNIK
TLILGHFSSRYSAEEIDQAIRRFCTAFHVTIPVHRLLPGQTHWDILRSDPIN
NT seq 879 nt   +upstreamnt  +downstreamnt
atgatactgacgataactggttattcgaccgccctattttcaacatggtatttcgttgaa
gagcttcgattattactcgatgcgggcgatggcattgcccctacgctcttacagaaatct
cgtaagattgaccatattttcctctcgcacgctgaccgcgatcacgtaacaggactgttg
cgcttgaatgaactaaacgcccgcgacggctttcccaccgtttattatccagccgatgca
ggatctattgcagcactagagaccttttcaaaacaatttgatgggcgagtaaaaaaaacg
gtatggcatccaataggtgatcagcaacacgttcagcttcgtaaaaacttatttgtgcaa
tcggcccgcaacaatcacgttgtcaaagcccaaccgcatgaaataaaaagcctgggctat
cagatttacgagacaaaaactaagcttaaatcagatttcgtcaatctatcaggagaagcg
ttgcggcagttagcggagaagtttgggcggcaaactctcacggatgaagtcaggacaaac
ttactagcttattccggcgacacacccgccgaaaattttgatcagtggaacaacacgcag
accttaattcacgaagcgacattccttacccgtgccgaatttgctacattagaaaccaac
cggaatcaacacagtacgctggaagatgttctggcggctgttgctgatcttaacatcaag
acgctgattctaggccatttctcgtcacggtattctgcggaagaaatagaccaagccatt
cgtcgtttctgcaccgcctttcacgtaacgattccggttcatcgccttctaccggggcaa
acgcattgggatattttgcgaagcgatccgattaactaa

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