Spirosoma radiotolerans: SD10_04330
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Entry
SD10_04330 CDS
T03819
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_04330
Transporters [BR:
srd02000
]
Other transporters
Pores ion channels [TC:
1
]
SD10_04330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
AKD54245
UniProt:
A0A0E3ZU07
LinkDB
All DBs
Position
complement(1120696..1123686)
Genome browser
AA seq
996 aa
AA seq
DB search
MKKHVNYLFLLLLLCQGYAFAQNARVTGTVTGPDNQGLPGVNVQVSGTTVGTATDASGNF
TLNAPGNGSLVFSNIGYISQTVPINGRSVVTIQLAEDQKTLNEVVVVGYGTQRKTDVTGA
LTAISTKEFAQQPVTRLDQVLQGRAAGVQVSQTNGAPGGDARIRIRGANSVLGNNNPLYV
VDGFVGADFNFVNPSDIETIQILKDAASTSIYGSRGANGVVIITTKKGSKGLKVNYEGQF
STSEVIKKYDVLPAGEFAEIVNARATATGSNLPFTADQIAQFKQNGGTDWQSLVFRNGSG
QQHQITLSGGSDKTTFLVSGNYLNQNGIVNNSGFKRYNLRTNINTQINDKLSFRLNLWAT
RSQNHNTLDGGAIVQALAWAPTTPAYGADGQPTFTDPIGSVYRNPLDYLYDQSVDANKSG
ININGGVNYKLPIKGLSLDLQYAVNYLNLQNLNLNGKRLSNNVPTASRYSAEQVTLQNTN
NLNYDVKIGNHSINAVAVLETQQFTSRDFTASASGLRFPQLGYDNIGGNTAATVASSYQK
WTLLSLLGRINYGYKDKYLVSAAVRRDGSSKFAAGNQYSVFPSVALGWRLSEEEFIKKLN
VFSNLKLRGSWGMTGSQALGPYSTISSYSSAQVAFNNTAATSGVILGNPGNPDLKWETTK
QVDVGLEMEFLNGRLHIEADYFKKNTTDLLLNVAIPSYAGGGTQARNVGEVENKGFEFSI
GGTPLVAGSFRWETNLNLSTLQNKVLSLGGLPRLGQGTGVGGGMSTTNEFMLIPGEPLGS
YWGLKYLGTWKPNEADAAAKQGRVPGDPHYQDLNGDNSITTDDFQIIGRAFPKATGGWNN
TFTYKGLTLNVFFNGVFGVDKLNYTRAAALSGSGDARQFILSEIRDYYRPGNETSDVPAF
TKTYQPFTQSSRFLENGSFVRLKNVSLSYNVPTGFIHNKANIRVFASATNLLTITKYKGP
DPESARVGSNTDTAIGIDYGSYPNAKQYTLGINLGF
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacatgtaaactatctcttcctgctgctgctgctgtgccaaggctacgccttc
gctcagaatgccagagtgacgggtacggtgaccggccccgacaatcaggggttgccgggc
gtcaatgttcaggttagcggtacaacggtgggtaccgctaccgatgcatctggcaatttc
acgctgaatgcgccgggtaatggctcgctggtcttttcgaatatcggctatataagccag
acagtgcctattaatggtcgctccgttgttacgattcagttagcggaggaccagaaaaca
ttgaacgaggtagttgtcgttgggtacggtacccaacgcaaaaccgacgtaacgggtgcg
ctgacggccatttccaccaaggaatttgcccagcagccggttacccgactggatcaggtg
ctgcagggacgcgctgcaggtgtgcaggtaagccagacgaatggagctcctggtggcgat
gccaggattcggatcagaggagcgaactccgttttgggcaataacaacccgctgtacgtg
gtcgatgggttcgttggcgctgattttaactttgttaacccaagcgatattgagaccatt
cagatcctgaaagatgccgcatcgacctccatttatggtagtcgcggtgccaatggcgtg
gtgatcattacgaccaaaaaaggttctaaaggccttaaagtcaactacgaaggtcagttc
agtacgtcggaagtcatcaaaaaatacgacgtattaccggccggagaatttgccgaaatc
gtcaatgcccgcgccaccgctacgggctccaatctgccctttacggccgatcagatcgcg
cagttcaaacaaaatggcggcaccgactggcagagcctggtattccgtaatggatctggt
caacaacaccaaattacgctgtcgggtggtagcgacaaaacgacctttctggtgtcggga
aactatttaaatcaaaatggtatcgtcaacaacagcgggtttaagcggtataacctgcgg
accaacataaatacgcagatcaatgacaaactttcgtttcggctgaatctgtgggctaca
cggtcacaaaatcacaacacgctcgacggtggcgccatcgttcaggcactggcctgggca
cccaccacgcctgcttatggtgccgatggccagccgacgtttacggacccgattggttcc
gtttaccgcaatccgctggattatctgtacgatcagtcagtcgatgccaacaagagcggt
atcaacatcaatggtggggtgaactataagctccccatcaaagggctttcgctcgattta
cagtacgccgtcaattacctgaatttgcaaaacctgaacttaaacggcaagcgactctcg
aacaacgtaccgaccgcaagccggtattcggccgagcaggtgacccttcaaaacacgaat
aatctgaattacgacgtcaaaataggcaatcactccattaacgccgttgccgttctggaa
acacagcaattcactagtagagactttaccgccagtgcatcaggactacggtttccgcaa
ttgggctatgacaacatcggcgggaatacagccgctaccgtagcgtcgagttatcagaaa
tggaccctgctgtcgttgctgggacgtatcaactatggatacaaagacaaatatctggta
tcagcggccgtccgtcgggatggatcatccaagtttgcagcgggcaaccagtatagtgtt
ttcccatccgtagcgcttgggtggcgtttatcggaggaagagtttatcaagaaactcaac
gtattcagcaacctcaaactgcggggaagctgggggatgaccggcagccaggcccttggt
ccttactcgacgatatcgtcctatagctcagcccaggtcgcgttcaacaacacggctgcc
acctcgggggttattttgggcaaccccggcaatccagacctcaagtgggaaacaaccaag
caggtggacgtaggccttgaaatggaatttctgaacggacggctgcatattgaagctgat
tattttaagaagaacacgaccgaccttctcctgaacgtagccattccgagctatgccggt
ggtggtacccaggcccgaaatgtgggtgaggttgagaacaaaggctttgagttttcaatc
ggcggtacacctttggtagcgggaagtttccgctgggagacgaatctgaacctgtctact
ttacagaacaaagtactcagtctgggtgggctgccccggctgggacagggtacgggcgtt
gggggtggcatgtcgaccacgaatgaatttatgctgataccaggcgagccactgggttcg
tattggggcctgaagtatttgggaacctggaaaccaaacgaagccgatgcagcagccaag
cagggtcgtgtaccaggcgatccacattatcaggatctcaacggcgacaattcgatcaca
acggatgactttcagattataggccgggcatttccgaaagcaacgggtggctggaacaac
acatttacgtataaaggactgaccctgaatgtattcttcaacggtgtatttggtgtcgat
aagctcaactatactcgggcagcagccctgtcaggctcgggcgatgcgcggcaattcatt
ctgtcggagattcgggattactaccggcccggtaatgaaacatcggacgttccggcgttt
acgaaaacatatcagccgttcacccagtcgagccggttcctggaaaatggcagcttcgtt
cgtttgaaaaacgtaagcctttcctacaacgtacccactggattcattcataacaaggcg
aatatccgggtatttgccagcgcaacgaatctgctgacgatcacaaaatacaagggcccg
gatccagagtccgcccgcgtcggttcgaacaccgataccgccatcggtattgactacggt
tcctatccaaatgccaaacaatatacgctcggtataaacctgggcttttaa
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