Spirosoma radiotolerans: SD10_04505
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Entry
SD10_04505 CDS
T03819
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
srd
Spirosoma radiotolerans
Pathway
srd00300
Lysine biosynthesis
srd00470
D-Amino acid metabolism
srd01100
Metabolic pathways
srd01110
Biosynthesis of secondary metabolites
srd01120
Microbial metabolism in diverse environments
srd01230
Biosynthesis of amino acids
Module
srd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SD10_04505
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SD10_04505
Enzymes [BR:
srd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SD10_04505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AKD54277
UniProt:
A0A0E3V5L1
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All DBs
Position
1170997..1172268
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AA seq
423 aa
AA seq
DB search
MQLNNRTYQIQDVNVLDIADEFGLPLYVYDADKIIEKIGLLRSSFSGVNLKIKYAAKALT
NISILKLMRQQGVEMDSVSVNEARMGMLAGFAPGQIMFTPSGVSFEEIREAVDLGLQLNV
DSLPLLEWVGQTYGSQVAVSIRINPHISEGGNIKISTGHADSKFGVSILQRDAIRELTEK
YQIPVSGLHIHTGSDFKNADAFLRGADILFDLAADYPNLTFIDFGSGFKVAYKEGDHVTD
VAELGRKVSAAFQNFCQQYGRDIELWFEPGKFLVSESGHLLVKTNIVKENPTRTFVAVDS
GLNHLIRPMMYDAYHDIKNISNPSVADETPVEKTYNVVGYICETDTFATDRSLPEVKPGD
VLSFENAGAYGFSMASNYNARFRPAEVLVYEGRPYLIRQRETFDDLLRGQVDIPALNLEV
IEQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaaataaccgtacttaccagattcaggatgtcaatgtattggatatagccgat
gaattcggtttgcctttatacgtctacgacgctgacaaaattatcgaaaaaatcggcttg
ctccggtcatcctttagcggagtcaacctaaagataaagtatgcggccaaggcactgacc
aatatatcaattttgaagttgatgcgtcagcagggcgttgaaatggattcggtatcggtc
aacgaagcccgcatgggtatgctggctggttttgcaccgggccagatcatgtttaccccc
agtggcgtgtcgtttgaggagatccgcgaagcggttgatttgggcttacagctcaatgta
gacagcctgccgctgctggaatgggtgggtcaaacgtatggaagtcaggtcgcggttagt
atccggatcaacccgcacattagcgagggcggcaatatcaagatttcgacgggtcatgcc
gattccaaatttggtgtttcaattctgcagcgggacgccattcgtgaactgactgaaaag
taccagattccggtttctgggctgcacattcataccggctcggatttcaagaacgccgat
gcctttctgcgtggagcggatatcctgttcgacctcgctgccgattacccaaatctgaca
ttcatcgactttggcagtggctttaaagtagcttacaaagaaggcgatcacgtaactgac
gtggccgagctgggccgtaaagtatcagcggcttttcagaatttctgtcagcaatacggg
cgcgatatcgagctttggtttgagccgggtaagtttctggtcagcgaaagcgggcatctg
ctggttaaaaccaatatcgttaaggagaatccgacacgcacgtttgtagctgttgattct
ggcttgaatcacctgattcgccccatgatgtacgatgcgtatcacgacatcaaaaacatc
tcgaatccatcggtggcggacgaaacgccagttgagaaaacctacaacgtcgtcgggtat
atttgcgagacggacacctttgctactgatcgctcattgcctgaagtaaaacccggcgat
gtgctgtcgttcgagaatgcgggcgcgtatggcttcagtatggcatcgaattacaacgcc
cggtttcgccctgccgaagtgcttgtgtatgagggacgtccatacctgatccgtcaacgc
gaaacgttcgatgacttgttacggggccaggtcgatatacccgcattaaatttggaagta
atagagcagtaa
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