Spirosoma radiotolerans: SD10_06730
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Entry
SD10_06730 CDS
T03819
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_06730
Transporters [BR:
srd02000
]
Other transporters
Pores ion channels [TC:
1
]
SD10_06730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
STN
CooC_C
TTR_TEN1-4
FecR_C
Big_1
MG4
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
AKD54651
UniProt:
A0A0E3V6L8
LinkDB
All DBs
Position
complement(1717851..1721303)
Genome browser
AA seq
1150 aa
AA seq
DB search
MKNQYLFFPMLLVGVYTMPQPAVAQLLTRAQPPIERTTNQRPPTPDGSPLQHNRRSRSLK
KALTELERRFNVSVAYDEQLLAGRQTEVDLDGLSLEQALTQLIDAQGLRYRKVKDKLFVI
QGASPKADKAAPVDNSASVSLASLSSDVVSAKAEVASTVTGRVLDETGSPLPGVTVVLKG
TTTGTTTNAEGVYTLSVPDGNATLTFSFIGYTTQDVAVNNRSTVDVRLVPNATELNEVVV
IGYQAVRKRDVTGANDVINPTEANRVTAQSLPESIQGLAPGVTVRNTGVPGQQASIQIRG
VASFLNTDPLYVVDGMIADANPTLNSDDIESIQILKDASAAAIYGSRAANGVIIVTTRQG
KEGPARVSFSAKYGVQQAYKRWDVMNASEFAATQRQQYQNAGQAPLSSVAEATFNPNVNT
DWQDQVLRTGSLQNYNINLSGGTKTGQYYISGSYFNNTGYVIGSNFNRASLRINTRSVLN
RFTVGENLVLTNSNTQNQPAGTNPIYDMAYNLPVIPVQDPSYISPTNPLGYGIGSFNAVS
YAFNPVAARSLAPSRTNVARLVGNGYVEYKFADWLSYRFNAGLDANFSYNQNLRYLGVFQ
YNAAPVPTSVGEDRSQYRSFLFENTLNFNRTFGAHNINGVVGISQQTTRSDITSGSRTNL
GYAGGQYFTTIGAATGISNSAGGTPDYYRILGYLGRINYTYGDRYLLTLTGRVDQDSRFG
ASNRTGFFPSVAAAWRISQEKFFHVDWISELKLNVSYGKLGIVVPTLGSFPYTAYINSNP
RAIFGTDQAANVGAYQAQLSNPDIRWEQRIQQNVGVTASFLNNRIFTEINVYNSLSSNAI
LNLTVPGYLGNLRGNPYVNTASIRNRGIEFAATYRSTKHAFKWDVSGNFTTIKNRVESVG
NQGQGINYIVSGNTRSQVGNPIGQWFVLKSNGLFQSQEEINNYRGADGSLVQPFAKPGDI
RYVDTNNDGRIDVNDRQFVTSPWPTLQAGAQFNGSYKNFSLNIQLVGTFGYTVYNDVRRI
LDSYQNTNFRRDISPWTPTNTGTTDPRLGLESGDQGIISNNLAYSDRWLENASYVRFRNI
EIGYNLPKELANRFHARGARIYVSGQNLFTITGYSGLDPDVTGANIQERGVDNGHWPTPR
VISLGINCDL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccagtatcttttttttccaatgctgttggtcggggtttataccatgcctcaa
ccggccgtagcgcagttgctcacccgcgcgcagccacccattgaacgtacaacaaaccaa
cgcccgcctacacccgatggatcgccccttcagcacaaccgccgtagccggtcccttaag
aaagcactgaccgagctcgaacgacgattcaatgtcagcgtggcctacgatgagcagttg
ctggccggacgccagaccgaagtcgatctggatggcctctcgctcgaacaagccttaacg
caactgatagacgcgcagggattacgctatcgcaaagtaaaagacaagctttttgtcatt
cagggggcttccccaaaggccgataaagccgcccctgttgacaactcggccagcgtatcg
cttgcatcgctgagcagcgatgtcgtttcggcgaaggccgaggttgccagtacggttacc
ggacgcgtacttgatgaaacgggcagcccgctgcctggtgttaccgttgttttgaaagga
acaacgactggtacgacaaccaatgccgaaggggtctatacgctatcggtacctgacgga
aatgctacgctgacgttctcctttattggctacacaacgcaggatgtggcggtcaataac
cgtagcacggttgatgtcaggctagttcccaatgctaccgagttaaacgaggtggtcgtg
attggttatcaggctgtacgcaagcgggacgtaaccggggccaacgacgtcatcaatcct
accgaagccaaccgggtaacggcccagtcgctgccggagtccattcaggggctagcgccg
ggcgtaacggtacggaatacaggcgtacctggtcaacaggcgtccatccagatacggggc
gtagccagtttcctgaatacagacccgctttacgtagttgatggcatgattgccgacgcc
aacccaacgctcaactcggatgatattgagtctatccagattttgaaagatgcatcggcg
gctgccatttatggatcacgggcggccaatggcgtcatcattgtcacaaccagacaaggc
aaggaaggaccagcccgagtgtcgttttcggctaaatatggcgtacagcaagcgtacaaa
cgctgggatgttatgaatgcatccgagtttgccgctacgcagcggcaacagtaccagaac
gcaggtcaggcaccactaagcagcgtggcggaggctacattcaacccaaatgtaaacacc
gactggcaggaccaggtactccgaacgggtagtttacagaattacaacatcaacctgtcg
ggcggaacaaaaacagggcaatactatatttcagggagctacttcaacaataccggttat
gtcatcggcagcaacttcaaccgggccagcctgcgaatcaacacccgcagcgtactaaac
cggtttacagtgggcgaaaacctcgtgctgaccaactcaaatacccagaaccaaccagcc
ggtacgaatccaatttacgacatggcctataacctgcccgtcattccggttcaggatccg
agttacatcagtccgacgaacccgctgggctacggaattggctcgttcaacgcggtgagt
tacgcctttaaccccgtagcagcccgtagcctggcccccagccggaccaacgttgcccgg
cttgttggcaacggctatgtcgagtataaattcgccgactggctgagttaccgcttcaac
gcgggcctggacgctaactttagttataaccaaaacctgcggtatctgggtgtatttcaa
tacaatgcggctcccgttccaacatcggtcggcgaagatcggtcgcaatacagaagcttt
ctgttcgagaacacactgaattttaaccggacgtttggagcgcacaatattaacggcgta
gtcggtatcagccagcagacgacccgcagcgatataacgtccggttcacgaaccaatctg
ggttatgcaggcggacagtatttcacgaccatcggggcagctacgggtatctcgaattcg
gccgggggaacacccgattattaccgcattctgggctatctcggtcggatcaattatacg
tatggtgatcggtacctgctaaccctgaccgggcgtgtcgatcaggactcgcgtttcggg
gccagcaaccgaacgggcttttttccatctgtagcagcggcctggcgcatcagccaggag
aagtttttccacgtcgactggatttcggagttaaagctgaatgtgtcgtatggtaagtta
ggtatcgtcgtgccaacgctaggttcatttccctatacagcttatatcaacagcaaccca
cgagccattttcggcacggaccaagcggctaacgttggtgcctatcaggcccaactgtcg
aacccggatatacgatgggaacagcgaatccaacagaacgtcggtgtcacggccagtttc
ctgaacaaccggattttcaccgagatcaacgtctataattccctatcgtcgaatgccatt
ctgaacctgacagtaccaggatatttgggtaacctgcgcggtaatccgtacgtcaacacg
gcctcgatccgcaaccggggcattgagtttgccgccacgtatcgtagcacgaaacatgcc
tttaagtgggatgtatcgggaaacttcaccacgattaaaaaccgggttgaaagcgtcggc
aatcaggggcagggcattaattacatcgtcagcggcaacacccgttcgcaggtaggaaat
cctattggacagtggtttgtgctcaaatcgaacggcctgttccaaagtcaggaagaaatt
aacaactatcgcggagcggatggctcactcgtacagccttttgcgaagccaggagacatt
cggtatgtagataccaacaatgacggccggattgacgttaacgatcggcagtttgttact
tctccctggcctacgttgcaggccggagcgcagttcaacggatcctacaagaacttttcg
ttgaacatccaattagtgggcacgttcggctacaccgtgtacaacgatgtccggcgtatt
ctggatagctaccagaataccaacttccgccgtgacatcagtccgtggacacccacgaat
accggcacgacggatccacgtttaggtctggagtcgggtgatcagggcattatttccaat
aacctcgcctacagcgaccgttggctcgaaaacgcatcctacgttcggtttcgtaacata
gaaatcggctacaacctaccgaaagagctggccaatcgtttccacgcacggggtgcccgt
atttatgtcagtggtcagaatttattcacaatcaccggctattccggactcgaccccgac
gtgacaggggccaacattcaggaacggggtgttgataatggtcactggcctacaccacgg
gtaatctccttaggtatcaattgtgatctataa
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