KEGG   Spirosoma radiotolerans: SD10_07340
Entry
SD10_07340        CDS       T03819                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
srd  Spirosoma radiotolerans
Pathway
srd03410  Base excision repair
srd03430  Mismatch repair
srd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:srd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SD10_07340
   03430 Mismatch repair
    SD10_07340
   03440 Homologous recombination
    SD10_07340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srd03400]
    SD10_07340
DNA repair and recombination proteins [BR:srd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SD10_07340
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SD10_07340
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SD10_07340
SSDB
Motif
Pfam: DHH RecJ_OB DHHA1
Other DBs
NCBI-ProteinID: AKD54749
UniProt: A0A0E3ZV01
LinkDB
Position
1857877..1859616
AA seq 579 aa
MIAQSSPPVKRWITKPFPDSVEQQGAIQTLTNSLGVSPFLAALLIQRGVQTYEEARMFFR
PEIGHLHNPFEMKDMDRAITRLQMAMLPERQEKILIYGDYDVDGTTSVALVYGFLKNYHT
AIDYYIPDRYKEGYGISQQGIQWAADNGFSLIIALDCGIKSVERVAEAKELGVDFIICDH
HRPGDELPDAAAVLDPKRDDCAYPYKELSGCGVGFKLLHAFCLHKEIDLSQLYPCLDLVA
VSIASDIVPVTGENRVLAYYGLKQINSDPRTGLKALIKIAGFSRELDITNLVFGLGPRIN
AAGRIQHAKAAVQLLLAESEEEADEFAMAINKHNNSRREFDSSITEQALAMIRENELLSQ
AKSTVLFDASWHKGVIGIVASRCIEHFHRPTIILTQSNDKAAGSARSVPGFDVYEAIEEC
SDLLEQFGGHTFAAGMTMSVNNIDAFRKKFEEVVSRTIKEEHLTPLIDIDLPLDFSEISD
KLYRIVRQMGPFGPHNLQPTFMTEDVYLVSEPIIMKEKHLKINVRQGRGGQTLTAIGFGF
AHVADQLRPGQPFSICYQVEQNHYNGNTTLQLMLKDVKV
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgatagcccaatcgtcacctcctgtaaaacgctggatcaccaaacccttcccggattcg
gtggagcagcagggcgccatacagacattaaccaattcgcttggcgttagtccatttctg
gcggccttattgatacaacgaggtgtacaaacctacgaagaagcgcggatgttctttcgc
ccggaaataggccatttgcataacccgttcgaaatgaaggacatggaccgggctattaca
cgtctgcaaatggcgatgcttcccgagcggcaggagaaaatcctgatttatggcgattat
gatgtagatggaaccacatcggtagcgctcgtgtatggctttctgaaaaactatcacacg
gccatcgattattatattccggaccgctataaggaagggtatggtatttcgcagcaggga
attcaatgggccgccgacaatgggttttccttaattattgcgttagactgtggtatcaag
tcggttgagcgggtcgctgaagcaaaagaactcggcgtcgatttcattatttgtgaccac
caccggccaggtgatgaactgcctgatgcagccgccgtacttgatcccaaacgggacgat
tgcgcctatccctataaagaattaagtggctgtggcgtaggttttaaactgctccacgca
ttctgtttgcataaagaaattgacctgagccagctctacccgtgcctcgatctggtggcg
gtcagcattgcgtcggacattgtgccggttacgggcgaaaaccgggtgttggcctattac
gggctcaaacaaataaattcggatcctcgcacaggcctcaaggcattgatcaaaatagct
ggtttttcgcgggaattagacatcacgaacctggtattcgggcttgggccgcggatcaat
gccgctggccgaatccagcacgcgaaggcagctgtgcagcttctgttggccgaatcggaa
gaggaagcggatgagtttgcgatggcgattaacaaacataacaacagccgacgcgaattt
gacagcagtattacggaacaggcgctggccatgattcgtgaaaatgaattattatcgcag
gccaaaagcacggtgctttttgatgccagctggcacaaaggagtgattggaattgtggcg
tcccgctgcatcgagcactttcaccgtccaaccatcattctcacccaatcgaacgacaag
gcggccgggtcggcgcggtcggtaccgggtttcgacgtgtacgaagccattgaagaatgt
tctgatttgctggagcagtttggcggccacaccttcgctgctggtatgactatgtcggtc
aataatatcgatgctttccggaaaaaatttgaagaagtggtttcccggaccatcaaagag
gagcacctgaccccactgattgacattgatctgccgctggattttagtgagatcagcgat
aagctgtaccgaatcgttcggcaaatgggcccgtttggaccacacaacttacagcccaca
tttatgacggaggatgtttatctggtgagtgagccaatcattatgaaagagaagcacctc
aaaataaacgttcgtcagggtaggggggggcagaccttaacagccattgggtttgggttt
gcccatgtcgcggatcaactccgaccgggccagccgttttcaatctgttatcaggttgag
caaaaccactacaatggaaacaccaccctccagttgatgctgaaagatgtaaaggtgtag

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