Spirosoma radiotolerans: SD10_11660
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Entry
SD10_11660 CDS
T03819
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_11660
Transporters [BR:
srd02000
]
Other transporters
Pores ion channels [TC:
1
]
SD10_11660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec_b-barrel
CILP
Dockerin_1
Doppel
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
AKD55465
UniProt:
A0A0E3ZW32
LinkDB
All DBs
Position
complement(2868001..2871162)
Genome browser
AA seq
1053 aa
AA seq
DB search
MNDSLRLRKETVCMLLFCMLATVWANAQTLISGKVTSAEDQQPIAGANVLVKGSTTSGTF
TGADGGFTLSVPTNTSLIISYIGYQAQEVTVGSQTNFSIVLTPSITSLSEVVVTGYSSEK
KKDITGSVSIVDIKALKSIPSGSAVQALQGQVPGVTILNSGAPGSPSNIFIRGISSFGNT
QPLVLIDGIQAELNDVSATDIESVQVLKDAGAAAIYGVRGSNGVIIVTTKKGRSGQPTIA
YDAYYGSQQPLQGNVFNLMNSSDFARLTKVAYPTTGLFQNGLPDYTFRGPSATGIGNTGD
AAVDPTKYNFDATNPARNYLIQAVNKTGTDWFHELFKNAPMTSHNLTASGGTDKSNYMVS
LNYFNQQGTMLKTYLKRYSGRVNTQFKVKNNIRIGENAYFFYKQNPGFDNLSSGNPIAWT
YRAMPIIPVYDIKGNYGGTFAGPELGSSSNPVAVQMNTSNNKMNTWDVVGNVFAEVDFLK
HFTARTSFGGSIDNQYATNFTFTPYNNSEGNTNPNSFAETALFNTNTMWTNTLTYTNAVG
KHNVKVIAGSEAIRNYGRAVTASSSGFFSTNYDYLTLNNGTSNVTNTSSAYENTLFSLFG
RLDYSFNEKYLLGVTVRRDGSSRFGSERRYGTFPSVSAGWRISGEEFMKNVTWLNDLKLR
GSYGVLGSQNNVSPQNAFTLFGGSFFDAYYDISGGGKLAQGFAQTNIGNPNTGWEQNVVT
NVGLDATVFNKLDLSVEYYKKSINGLLFAQTLPATVGGATAPTVNVGDIQNKGVDIGITY
RGTVSNDLQFSVGANITTYNNKVINIPSPTYFETANTQNLGNVVRNQVGQEVSSFFGYNV
IGLFRSDAEVSASPTQSGAAPGRFKYQDVNGDGKIDASDRTFLGSPNPDFTYGLNLGLTY
KRFDFSTTLYGSQGNEIFNTVKSFTHFFSTYVGAKSNDLLNAWTPENPNSNIPKIESTGS
FSSSGVPNSFYVENGSFLKMRSLVIGYTVSPLLLRKYGLNKLRVYAQGANLFTITKYSGL
DPEVSGLSSAFGVDYGNYPSNQKNFIFGLNVSF
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactcactacgtcttagaaaagaaactgtgtgcatgctgctcttctgcatgctg
gcaacggtttgggcaaacgcgcaaacactaatttcaggaaaagtcaccagtgctgaggat
cagcaacctattgcgggagccaatgtattagtaaaaggatcgacaacgagtggcacgttc
accggtgccgatgggggctttacgctctccgtcccaacaaataccagcttgattatttcc
tatatcggctatcaggctcaggaggttaccgttggttcacaaacaaacttctcgattgtg
ttaaccccatccattacttcactgagtgaagtggtggtaacgggttactcatccgaaaag
aagaaagacataaccggctctgtatccattgtcgacataaaagccttaaagtcaatccct
tccggatcggctgtacaggcattacaagggcaggtaccaggggtaaccattcttaattca
ggtgcgccgggaagtccgagtaatatcttcattcggggaataagctcgtttggcaatacc
caaccgctggtgctgatcgacggtattcaggcggaactaaacgacgtaagcgccaccgat
attgagtcggttcaggtactgaaagatgcgggcgctgctgctatttatggcgttaggggc
tcgaatggggtgatcatcgtaaccaccaaaaaagggcggtcgggccagccaaccattgca
tatgatgcctattatggctcacaacaacccttacaaggcaatgtctttaacctaatgaac
tcctcggacttcgcccgcctgaccaaagtggcctatccaactacggggctgtttcagaat
ggcttacccgattataccttccggggaccaagcgcaacaggcattggcaatacaggagat
gccgcagttgatcccaccaaatataacttcgatgctaccaatccggccaggaattacctg
attcaggcggtcaacaaaacgggtaccgactggtttcacgaactgtttaaaaatgcgccg
atgaccagccacaacctgacggccagtggcggtaccgataagtcaaactacatggtttcg
ctcaattacttcaatcaacagggcaccatgctgaaaacgtaccttaaacggtattcaggg
cgcgtgaacacacagtttaaagtaaaaaacaacatccgaattggcgagaatgcatatttc
ttctacaagcaaaaccctggtttcgacaacctgagtagcggtaacccgattgcctggacc
taccgggccatgcccatcattccggtctacgacatcaaaggaaactacggcggaacgttt
gcgggacctgaattgggtagctcatcgaacccggttgccgttcagatgaatacgtccaat
aataagatgaatacctgggatgtggttggtaatgtatttgccgaggtcgatttcctgaag
cactttacagcccgtaccagctttggtggaagcattgataatcaatacgctacaaacttc
acctttaccccttacaacaactctgaaggaaacacaaaccccaattcattcgctgagact
gcgttgttcaacaccaataccatgtggacgaataccctgacgtataccaatgcagtcggg
aagcataacgtgaaagtgattgccggttcggaagccattcggaattatggtcgggcggta
acggcctccagcagtggtttcttttccactaactacgactacctgacgctcaacaacggt
acctctaatgtaaccaataccagcagtgcctacgaaaataccttattctcgctctttggc
cgactggattactccttcaatgaaaagtacctgttaggcgtaacggttcgtcgcgatgga
tcgtcgcgatttgggtcagaacgtcggtatggcaccttcccatcggtatcggcgggctgg
cgcatatcgggtgaggaatttatgaaaaacgtgacctggctcaacgacctgaaactgcgt
ggtagctatggtgttctgggttcccagaataacgttagtccccaaaatgccttcaccctg
ttcggcggctcgttcttcgatgcctattacgacattagtggtggcggtaaactggcccag
ggttttgcacagacgaacattggaaaccccaacactggctgggagcaaaacgtagtgact
aatgttggcctcgatgctacggtgttcaacaaactggatctttcagtcgagtattacaag
aagtcgatcaatgggctactgtttgctcaaaccttaccagcaacagttggtggtgctaca
gcccctacggtaaacgtcggggatattcaaaacaaaggggttgatattggtataacgtat
agaggaaccgttagtaatgatcttcaattcagcgttggtgctaacattaccacctacaac
aacaaggtgatcaatatcccctcacccacctatttcgaaaccgccaatacccagaatctg
ggcaacgtagttcggaaccaggttggtcaggaagttagttcgttcttcggctacaacgtc
attggtttgtttagaagtgatgctgaggtaagcgcttcacctacgcaaagcggagccgct
ccaggccgctttaaataccaggatgtgaacggcgacggcaaaattgacgccagtgaccgt
acattcctgggaagcccaaaccccgactttacgtatggactgaacctgggcctgacctac
aagcgattcgacttttcaacaacgctttatggctcgcagggtaacgagattttcaatact
gtgaaatcgtttacgcacttcttcagtacgtatgtgggggccaaaagcaacgatctgcta
aacgcctggacacccgaaaatccgaattcgaacatcccgaaaattgaatcgacaggatca
tttagttcatcgggtgtgcctaactccttctatgtcgaaaacggctcgtttctgaaaatg
cgctcgctggtgattgggtatacggtaagcccgctgctgttacgtaagtacggcctgaat
aaattacgggtatatgcccagggtgctaacctcttcacgattacgaaatacagtggcctg
gaccccgaagtaagcggacttagctcggcctttggcgtcgattacggcaactaccccagc
aatcagaaaaatttcatctttggccttaacgtctctttctaa
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