Spirosoma radiotolerans: SD10_13420
Help
Entry
SD10_13420 CDS
T03819
Name
(GenBank) exodeoxyribonuclease V
Organism
srd
Spirosoma radiotolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Swm2
Mu-like_Pro
Motif
Other DBs
NCBI-ProteinID:
AKD55751
UniProt:
A0A0E3V7U6
LinkDB
All DBs
Position
complement(3306051..3309395)
Genome browser
AA seq
1114 aa
AA seq
DB search
MFKIYSSSAGSGKTYTLTKEYLKLALRPDVEDSYFRRILAVTFTNAAANEMKNRILENLS
GIAGTKESPLLTELVAELYGAQPGTDSFDVAKGALRKKASGVFRTILHRYADFSVTTIDS
FTQRIVMAFTDELGLPYSFEVELETDEVLEMAIDNLIEKAGTDEMEEITAILSEYYTNTA
AEGKSWNQLPELLKEFGRNLTSDQFYEAVNAAQELSPGALRVIRTQLLTHNQQVEAEIIT
HGQRAWKCITEAGLDEKDFSYGASGVGGFFKAIAEGNAQRDAGTRVHNALNNGDWYTKKT
PLPVQGLIDGMASELADCITHILRVRDERGLQVTLFDCLLPHLQKLALLKQMRVEFDELL
RKDGRVHISEFNKKILSIVASEPVPFLYERLGTKYNHILIDEFQDTSRLQFANLLPLIEN
ALGADHFNLAVGDGKQAIYRFRGGDMDQIVALHRKDLDTLKQAHNPGSWTADRIDMLDGH
LQEALLDTNWRSAEPIVRFNNDFFEFTARKFESQHPKLAEVFDPGKQFHQKAQPNAHTAG
HVQIDFVAKDVEAEKDITAQMLEKTMAHLDKALADGYSYGDIAILCRKKSHAKALANELN
ARRIPLVSADSLSLEFSDPVKWLVTLMQLLQRPDQKLLRYELLYLFHRVVQGIFPDDVLT
GKLSAVAERDIDATYAYLAEAGYPLDPYVMGQLNPYELAERLTAQFGLFNQAEHNPFLFR
FLDEVLAFNHKRSGHLSDFLLYWEGVRQKISVEGNARNAVSIQTVHRSKGLEFPVVIIPF
ANWKVEPINDSTIWLDLSAIRTDALTHENGAGQLTRLLSAPAHTTSKLRGTPKVIADQYE
DEFTRTFLENMNLLYVAFTRPTDRLYVISEAKDFTKGQQNTISHWLHAFLRDSEVARNCG
CAWQEGQLSYQISLCTDSFSHQKEEGPLDEIVLEEIVSGHRGQDLQLRRQADRMFDVATF
ERTRERDRKLCAALSLVRGPESIDTVLRQLVSEGLVRQAETAELKQSLMTLVTHPALSSL
FDASLRIDTDRSILSNKRVHGAPHRVVHYPDGHIVLVQYESVPVASELNDVPSSVANPMD
SLKYFTNLYREMGFHEVEGRLVYLSTEPNVVKVV
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatttatagctcttcggctgggtcggggaagacatacacgctcacaaaagag
tatcttaaactggctctgcggccagatgtggaggatagctatttccggcggattctggca
gtaacgtttaccaatgcggccgccaacgaaatgaaaaatcggattctggaaaatctgtcc
ggcatcgccgggacaaaagaatcccctctgttgactgaactggtggccgaactgtatggg
gcgcaaccaggtaccgattcgttcgatgtagccaaaggggccttacgcaaaaaagcgtcc
ggcgttttccgaaccattctgcaccgctacgctgattttagtgtaaccaccattgactcc
ttcacgcaacggattgtcatggccttcaccgacgagctgggcctgccttactcttttgaa
gtagagctggaaaccgatgaagtgctcgaaatggccatcgacaacctgattgaaaaagcg
ggtaccgacgagatggaggagattacagccattttgagcgagtactacaccaatacggct
gctgaaggtaaaagctggaaccaactccccgaactgctcaaagaatttggccgcaacctt
acatccgatcaattctatgaggctgtcaacgcggctcaggaactgtcgcccggtgcgctg
cgcgtcattcggactcagttgcttacccataatcaacaggttgaggccgagattattacc
catggccagcgagcctggaaatgcataaccgaggctggtttagacgagaaagattttagt
tacggagccagtggcgtcggcggtttttttaaagccattgcagaaggcaacgcacagcgg
gatgcgggaacccgagtccataatgcgctgaacaatggcgactggtacaccaaaaaaaca
cccttacccgttcagggcctaatcgacggtatggccagtgagttagctgactgtattacc
cacattcttcgcgttcgcgatgaacggggcctgcaggtcacattatttgattgcctgttg
ccgcatttgcagaagctggcgttgctgaaacagatgcgggttgaatttgatgagctactt
cggaaagatggccgggtacacatctccgaattcaataagaaaattcttagcattgtcgcg
tccgagcccgtcccatttctgtatgaacggctgggcactaaatacaaccatatcctgatc
gacgagtttcaggacacgtcgcggcttcaatttgccaacctgctgccgctgatcgaaaac
gccctcggggccgatcatttcaacctggccgttggcgatggaaaacaggcgatttaccga
ttccgcgggggcgatatggaccagattgttgccctgcaccggaaagatttggacacgctg
aaacaggcgcataaccccggttcctggacggcagatcgtattgacatgctggacgggcat
ttgcaggaagccctgctcgataccaactggcgaagtgcggagccaattgtccggttcaac
aatgacttcttcgagttcaccgcccgtaagttcgaaagccagcatccgaaattagcggag
gtgttcgatccgggaaaacaatttcaccagaaagcccagccaaacgcacacacggccggt
catgttcagatcgactttgtcgccaaagatgtcgaggccgagaaagatataaccgcacag
atgctcgaaaaaacgatggcgcatctggataaagcgctggctgacggctattcctatggc
gacattgccattttatgtcgcaaaaaatcgcacgcaaaagccctcgccaacgagctgaat
gccagacggattccgctggtgtcggcggactctctatcgctggagttttcagatcccgtc
aagtggctggtgacgctgatgcaactccttcaacgacccgaccagaagctccttcgttac
gaattgctatatctgtttcaccgggtagtgcagggtatttttcctgacgatgtgttgact
gggaaattgagcgccgttgccgaacgcgatatcgacgccacctacgcgtacctcgctgaa
gcaggatacccgctggacccttacgtgatggggcagctcaatccatacgaactggctgag
cgattgactgcccagtttgggctgtttaaccaggcggagcataacccatttctattccgt
tttctggatgaggtactggcatttaaccacaaacgaagcggccacctgagtgatttccta
ttgtactgggaaggcgtcagacagaagatttcggtggaaggaaatgcccgcaatgcggtg
agcattcagaccgttcaccgatcgaaaggacttgaatttccggtagttatcataccgttt
gccaactggaaagtggagccaatcaacgatagcacaatctggctcgacctgtcagcaatt
cggaccgatgccctcacgcatgaaaacggggcgggtcagctaacccgcttgttgtcggct
ccggcccatacgaccagcaaactgcgcggcacgccgaaggtaattgccgatcagtacgaa
gatgagttcacccgtacgtttctggaaaacatgaacctgctctatgtggcctttacccga
ccaacagaccggctttatgtgatcagtgaagcaaaggattttaccaaagggcaacagaat
accattagccactggctgcatgcgttcctgcgcgacagtgaggtggcccgaaactgcggc
tgtgcctggcaggaagggcaactcagttaccagatcagcctgtgtactgattcgttttcg
caccagaaagaggaaggaccgctcgatgaaattgtgctggaagaaattgtgagcgggcac
cgggggcaggacttgcagttgcgccgacaggccgaccgtatgtttgacgtagcgacattt
gaacgcacccgcgagcgggaccgaaaactctgtgcggccctgagcctggtaagaggtccg
gaaagcattgacaccgtgttgcgccaactggtaagcgagggccttgttcgccaggctgaa
acggcggagttaaaacaaagcctgatgactctcgtcacgcatcccgccctgtcatccttg
ttcgatgcatcgcttcggatcgatacggaccgcagtatattgagcaataaacgcgtgcat
ggcgccccgcatcgcgttgtgcattatccggatgggcatatcgtactagttcagtatgag
tcggtgccggtcgcatccgaattgaatgacgtgccttcatcggtggcaaacccaatggat
tcgttgaagtactttaccaatttataccgggagatgggctttcatgaggtagaagggcgg
ctggtctatttatcaactgaaccgaacgtcgtgaaggtggtttaa
DBGET
integrated database retrieval system
