Entry |
|
Symbol |
gyrB
|
Name |
(GenBank) DNA gyrase subunit B
|
KO |
|
Organism |
srd Spirosoma radiotolerans
|
Brite |
KEGG Orthology (KO) [BR:srd00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:srd03032]
SD10_16900 (gyrB)
03400 DNA repair and recombination proteins [BR:srd03400]
SD10_16900 (gyrB)
Enzymes [BR:srd01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SD10_16900 (gyrB)
DNA replication proteins [BR:srd03032]
Prokaryotic type
DNA Topoisomerases
SD10_16900 (gyrB)
DNA repair and recombination proteins [BR:srd03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SD10_16900 (gyrB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4155823..4157823
|
AA seq |
666 aa
MTNELIEEDAPIETALGNYGADNIQVLEGLEAVRKRPSMYIGDVGTRGLHHLIWEVVDNS
IDEALAGYCDKITVTINPDNSITVQDNGRGIPTGINTKMGVSALQMAMTMLHAGGKFDKD
TYKVSGGLHGVGVSCVNALSTDLRVEVHREGKIFEQEYKIGIPLYDVRVIGDAEDTGTRT
HFKPDGTIFTDTVYKYDTIAGRLRELAYLNKGIHIFLNDLRELDENGQPLRQDDFFSEGG
LVEFVEYLDQTRPALDGMKPIYMENTKGSTPVQVALIYNYEAGENVLSYVNNINTHEGGT
HVQGFRSALTRVLKNYADKNPGVLPKNSGKVTFSGEDFRKGLTAVISVKVAEPQFEGQTK
TKLGNQEVVSAVSQAMADLLETWLEENPNTAKGIVKKVLVSAQARIAADLAYKRIMTERK
DFMGGMGLPGKLADCSDTDPEKCELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEK
AMEHRIYENEEIKNIWTALGVRLEKKDDETVMNLDKLRYHKIIIMTDADVDGSHIRTLIL
TLFYRNMKALIDNGYIYIAQPPLYLIKKGKEERYCWTEAQREAAVKELAAGGKEESVGVQ
RYKGLGEMNAEQLWSTTMNPDSRTLKVVTVESAADADHVFSTLMGDEVAPRRDFIERNAK
YARVDV |
NT seq |
2001 nt +upstreamnt +downstreamnt
atgaccaacgaacttattgaagaagacgctcccattgaaaccgcgttaggcaattatggt
gccgataatatccaggtactagaagggctggaagccgtacgcaaacgtccatccatgtac
attggtgacgttggtacacgtggtctccatcaccttatctgggaagttgtcgataattcc
attgatgaagcgttggcaggttactgcgacaagattacggtaaccatcaatcccgataac
tcaattactgtgcaggataacggccggggtatcccgacgggtatcaacaccaagatgggc
gtctcggcgcttcaaatggcgatgaccatgctgcacgctggtggtaaatttgataaagat
acctataaagtctctggtggtcttcacggcgttggcgtctcctgcgtaaacgctctgtca
accgatctgcgggtagaagtgcaccgcgagggcaagatttttgaacaggaatacaaaatt
ggtattcccttgtatgatgttcgtgtcatcggcgatgctgaggacacgggcacgagaacg
catttcaagcccgacggtactatctttaccgatacggtttataagtacgataccattgca
ggccgtctgcgtgagttagcttacttgaataaaggcatccatatcttcctgaacgattta
cgggaactggacgaaaatggccaacccttgcgtcaggatgatttcttttcagaaggtggt
ctggtcgagtttgtcgaataccttgatcaaacccgccccgccctggatggaatgaagccc
atctacatggaaaatacgaaaggttcgacccctgttcaggtggccttgatatataactat
gaagcgggcgaaaacgtcctttcttacgtcaacaacatcaatacccacgaaggaggtaca
cacgtgcagggcttccgctctgccttaacgcgtgtattgaaaaactatgccgacaaaaac
cccggcgtgttacctaaaaactcgggtaaggtgaccttcagtggtgaagatttccggaag
ggtcttactgccgttatttcggtcaaagtagccgaacctcagtttgaagggcaaaccaag
acgaaactgggtaaccaggaagtggtgagcgcggtaagtcaggcaatggctgatctgctg
gaaacctggctggaagaaaacccgaatacggcaaagggcatcgtgaagaaagtgctggtg
tccgctcaggcgcgtattgcggccgatctggcctacaagcgcatcatgaccgagcgcaag
gacttcatgggtggcatgggccttccaggcaaacttgctgactgctccgataccgatccg
gagaaatgtgaattgtacctggttgaaggtgactcggctggcggaacggccaagcaaggc
cgcaaccgggcgtttcaggcgattcttccccttcgcggtaagatcctgaacgtggagaaa
gccatggagcaccggatctacgaaaacgaagagattaagaacatctggactgccctcggt
gtacgccttgaaaagaaagatgatgagacggtgatgaacctggataaacttcggtatcac
aaaatcattatcatgaccgatgctgacgttgacggtagccacattcgtaccttgattctg
acgctcttctaccgcaacatgaaggcgctgatcgacaacggctacatctatattgcgcag
cctccgctgtacctgattaaaaaaggcaaagaggagcgctattgctggacagaagcacag
cgcgaagccgcggtgaaagaactggccgctggtggtaaggaagaaagtgtgggtgttcag
cggtataaaggtttgggcgagatgaacgccgaacagctctggagtacgaccatgaacccc
gatagccgaaccttgaaagtcgtaacggttgaatcagctgccgatgcagatcacgtcttc
tcaaccctgatgggcgatgaagtagccccaaggcgcgacttcatcgaacgaaatgcaaaa
tacgcccgagtggatgtttaa |