Spirosoma radiotolerans: SD10_17140
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Entry
SD10_17140 CDS
T03819
Name
(GenBank) glycan metabolism protein RagB
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_17140
Transporters [BR:
srd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SD10_17140
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_6
TPR_4
Motif
Other DBs
NCBI-ProteinID:
AKD56378
UniProt:
A0A0E3ZWJ1
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Position
complement(4211484..4213202)
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AA seq
572 aa
AA seq
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MKNKILLSFLVLAGGSLFISCKDFLNYQPQGTLSSDNIKSADNADALVTAAYAAIGNGEM
IGPIASMWVYGSVRSDDAYKGGGGVGDVQDINLYEHYNLTQPQQGDGWMHPYTWEEYYRV
ISRANVALRSINDLTDTQFPLKKIRTAELRFLRGHAHFMLKMLFKYIPYVDETLSSDQIL
ATSNRALTNDQLWDKIATDFQFAMDNLPLTQTQVGRANKLSAAAYLAKLRLYQAYEQDDN
NKVVNINKDKLQQVVTLTNMVINSGKYSLQPDFAENFLPEFDNGVESIFAVQYSINDGTT
VGRLNFETGLNYPHGAPQYGCCGFHQPSQNLANAFGTDANGLPKFDTFNEGIIDFKTATV
DPRVDHSIGIDGHPYKYNASLPFSTSWIRDAGTYGFFQSMKEQQLATSSSYKKSGPFIGS
SKNIDIIRYADVLLWQAEAYIELGQQAQALPLINAIRARAAASTGRTKKADGTDPSNYLI
KPYDAAKWTQSYARRALQWERRLEFALESPRFFDLVRWGIAEPTLNAYLAKEIPRRSFLS
GGKFTAGRDEYLPIPQREINFTKGLYKQNPGF
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaattcttctttcgtttctcgttctggcaggtggaagcctgttcatatcg
tgcaaagactttctgaactatcagccccagggaacgctgtcgtccgacaacatcaagagt
gctgataatgccgatgcactcgtcacggcggcttatgctgccataggtaacggtgaaatg
attggccccatcgccagcatgtgggtatatgggagtgttcgctccgacgacgcctacaaa
ggcggtggtggcgtgggtgatgtacaggatatcaatttgtacgagcattacaatctgaca
cagcctcagcagggcgatgggtggatgcacccctacacctgggaggaatattaccgggtt
atttcccgtgccaacgttgccctgcggtcaattaatgacctgacggatactcagtttcct
ctgaagaagatacgtacggcagagttacgttttctgcggggacacgctcatttcatgctg
aaaatgttgttcaaatacattccctacgttgacgaaaccctgtcgagcgaccagattctg
gctacctccaatcgagctctgacgaacgaccagctttgggataaaatcgcgacagatttc
cagtttgccatggacaacttacccctaacgcagactcaggtaggccgggccaacaaattg
tcagcggctgcgtatttagctaaacttcggttgtatcaggcgtatgagcaggacgataac
aacaaggttgtcaacataaataaagacaaattgcaacaggtcgtcaccctgaccaatatg
gtcatcaactcgggtaagtacagcttacagcctgattttgccgaaaacttcctgcctgaa
tttgataatggcgtcgaatccatctttgcggttcaatattcgatcaatgacggaacgacg
gtaggccggcttaattttgagacgggtctaaactatcctcatggcgcaccacaatacggg
tgttgcggcttccaccagccgagccagaacctggccaatgcatttggtacggatgccaat
ggccttcccaaattcgatacgtttaatgagggaattattgacttcaaaaccgccaccgtc
gatccccgcgttgatcatagtattggcatcgatggccatccttacaagtacaatgcatcg
ctgcctttcagtaccagctggatacgggatgccggtacgtatgggttttttcagagcatg
aaagagcagcaactggcgaccagttcatcgtacaagaaaagtggcccctttattggtagc
tcgaaaaatatcgacattattcgctatgccgatgtgttgctttggcaggccgaagcgtat
atcgaactagggcaacaggctcaggcgttgccactgatcaatgcaattcgcgccagagct
gcggccagtaccggacgcaccaaaaaagcagacgggactgacccttcgaattatctcatt
aagccttatgatgctgctaaatggacccagtcctacgcccgcagagcgctccagtgggaa
cgcaggcttgagtttgctctggaaagtccacgtttcttcgatctggttcggtggggtatt
gccgaaccaacgctgaacgcgtatctggcaaaagaaataccccggcgatcttttctgagt
ggtgggaaatttaccgcgggccgcgatgaatacctgccgattccacagcgggaaattaac
tttacaaaaggcctttacaagcaaaatcccggcttttaa
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