Spirosoma radiotolerans: SD10_17355
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Entry
SD10_17355 CDS
T03819
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
srd03032
]
SD10_17355
03400 DNA repair and recombination proteins [BR:
srd03400
]
SD10_17355
Enzymes [BR:
srd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SD10_17355
DNA replication proteins [BR:
srd03032
]
Prokaryotic type
DNA Topoisomerases
SD10_17355
DNA repair and recombination proteins [BR:
srd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SD10_17355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AKD56413
UniProt:
A0A0E3ZXJ0
LinkDB
All DBs
Position
4264605..4265678
Genome browser
AA seq
357 aa
AA seq
DB search
MDLLELAHDPVETARAARLVYMSDTMPGISRQQAKDQFNYVDTHGNVIDNPDTLARIRSL
ILPPAWQNVWISPKANGHLQATGIDTKNRKQYRYHPKWNAIRSQTKFFRMVAFGEALPLL
RERLAKDLKKPELAREKVIAIALSVMEQTLIRVGNAAYEKEYGSYGLTTLKDRHVKLEGT
EMRFSFKGKKGIYHDITLHDRRLSRLVKACRDIPGKELFQYFDENGDRHPIDSGMVNAYL
HETMGDDFSAKDFRTWAGTVNALRLLAELEPCETEKELKKNVNTVLDEVSHKLGNTRTVC
RKHYVHPQILEAYECQDLNPYIKQKARFRQSSPYGLDGIEKLLLKFLKDQIKKTVEK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtggatttattggaattagctcacgacccagtcgaaacggccagggcagcccgcctggtc
tatatgagcgatacaatgccgggaatcagccgccagcaggcgaaggatcagtttaactat
gtcgatacacacggcaacgtcattgacaatcctgatacactagctcgcatccgcagcctg
atattaccgcccgcctggcaaaatgtctggattagtccaaaagcaaatgggcacttgcag
gcaacgggcattgataccaaaaatagaaagcaataccgttatcatccgaaatggaatgcc
attcggagccagacgaaattctttcggatggtggccttcggcgaagccctgcccctgctt
cgtgaacggttggcgaaggatttgaagaaacctgagcttgcgcgcgaaaaagtgattgcc
attgccctcagcgtgatggagcaaaccctgatccgggtaggcaatgcggcttatgaaaag
gagtatggttcttatggcctaacgacccttaaagacaggcacgtgaagctggaaggtact
gaaatgcgctttagcttcaagggcaaaaaaggaatttatcatgacattaccctgcatgat
cggcggttgtcccgcctggtgaaagcgtgccgcgatattccgggaaaagagctgtttcaa
tattttgacgagaatggcgaccgacatccgattgactcgggtatggtcaatgcttacctg
catgaaaccatgggcgacgatttttcggcaaaagatttccgcacctgggccggtacggta
aacgcgctgcggcttctggccgaactggaaccctgcgaaaccgaaaaggagttaaagaaa
aacgtcaacaccgttttagacgaagtgtctcataaactgggcaatacccggaccgtttgc
cggaaacactacgtacatccgcaaattctggaagcatatgagtgccaggatttaaaccca
tacatcaagcaaaaagcccgcttcaggcagagtagtccctatggactcgacggcattgag
aaattacttcttaaatttctgaaagaccagatcaagaagacggttgaaaaataa
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