Spirosoma radiotolerans: SD10_17820
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Entry
SD10_17820 CDS
T03819
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
srd
Spirosoma radiotolerans
Pathway
srd00470
D-Amino acid metabolism
srd00550
Peptidoglycan biosynthesis
srd01100
Metabolic pathways
srd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SD10_17820
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SD10_17820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SD10_17820
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srd01011
]
SD10_17820
Enzymes [BR:
srd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SD10_17820
Peptidoglycan biosynthesis and degradation proteins [BR:
srd01011
]
Precursor biosynthesis
Amino acid ligase
SD10_17820
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AKD58608
UniProt:
A0A0E4A1X5
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Position
4374573..4376225
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AA seq
550 aa
AA seq
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MKIGIFFGGPAREREVSFAGGRTALANLDKGLFEPVLVFVDGRGRFRLVSPEFLQSPSLR
DALPQDNSGFSVYDESLAPDALDATLPELRPEQFRNHFDMAFLAMHGPDCEDGAIQGLLE
WYKVPYTGPGLLGSAVGINKILQNELIALANGQQKKTATISRDAYEQADKAQFFQSLVDH
LGLPIVVKAPHQGSSIGVAIVREADLALFCRSVEQCFFTMSVQPDGWSRLSEWSALSTDE
KKELAQKMVSLDSGISFPVVIEQTGDVIKHPADFVTKLDAIARQGQPVSLASLNAEDEVL
FEEFITGQEFSCGVIQDDDQIAIALPPTEIYNVTSFDFESKYKLNTTKKRIPVETSLENN
RKIQLAVAEVFSRLGINVYSRIDGFLTPAGDVLLHDPNTIPGMSPSSLIFKQMAEIGLNL
SNSLTYLIRQSLRERIRTGKDTFHLKHLLALLDAQLAARKANPLPERVVSFGPTDEEFIA
AKQQYNDLAASGTVLPSLMYIKSKQESHEIPVNLLFKDTIAELETALSQPRHPLLIETAE
RARHITERYV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaataggcattttcttcggtggaccagcgcgggagcgggaggtctcgtttgccggt
gggcgtactgccctggctaatttagataaagggttgttcgagccggttctggtgtttgtg
gatggacgcggacggtttcggcttgtatctcctgaatttctgcaatcaccatcgctgcgc
gatgccttaccacaggataactctggcttttcagtatacgatgagtcactggcgcctgat
gcacttgatgctacattacccgaattacgcccggaacagtttcgaaaccatttcgacatg
gcctttctggctatgcacggccccgactgcgaagacggtgccattcagggcctcttagaa
tggtacaaggtgccttacacagggccagggctgcttgggtcggcagtgggtattaacaag
atcctgcaaaacgagctgattgcactggcgaatggccaacagaaaaaaacggctaccatt
agccgggatgcctacgaacaggctgataaagcccagttttttcaatctctagtcgatcac
ctgggcctgccgattgttgtcaaagctcctcatcagggttcatccattggtgtcgctatc
gttcgtgaagcggacctggctttgttttgccgttctgtggagcaatgtttcttcaccatg
agcgtacaaccagatggctggagcaggctaagtgagtggtcagccctgtcaactgatgaa
aaaaaagaactggctcagaaaatggtcagtttagactcaggcattagttttccagttgtc
attgagcaaacaggcgacgtaatcaaacacccggccgatttcgttacgaagctggacgca
attgcccggcagggccagccagtgtcgctagcttcgttgaacgccgaagacgaagtgctg
ttcgaagaatttattactggtcaggagttttcctgtggcgttattcaggacgacgaccag
attgccattgctttgcctcctacggagatctataatgtaacaagcttcgatttcgaatcg
aagtataagctgaatacaaccaaaaagcggatacccgtagagacaagtctggaaaacaat
cgtaagattcagttggcggtagcggaggtattcagccggttgggtatcaacgtctattca
cggattgatgggttcctgactcctgctggagatgtgctcctgcatgatccaaacactatt
ccaggcatgtcaccctcctcgctgatcttcaaacagatggctgaaattgggttgaactta
tcgaattcgcttacgtacctcattcgccagtcgctacgggaacgcattcggacggggaaa
gacacgttccatttgaaacacctgctggcattgctggatgcacaacttgccgcccgtaaa
gccaatccgttgcccgagcgggtcgtttcatttggccctactgatgaagaattcattgcc
gcgaaacagcagtataatgacctggccgcttccggtacagtgctgccctcgttaatgtac
atcaagagcaaacaggaatcgcatgagattccggtcaacttgctttttaaagatacaatt
gctgagttggagacagccttaagtcagccgcgtcaccccttattgattgagacagccgaa
cgtgcccgacatattaccgaacgatacgtatag
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