Spirosoma radiotolerans: SD10_18360
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Entry
SD10_18360 CDS
T03819
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
srd
Spirosoma radiotolerans
Pathway
srd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SD10_18360 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srd03019
]
SD10_18360 (groEL)
03110 Chaperones and folding catalysts [BR:
srd03110
]
SD10_18360 (groEL)
03029 Mitochondrial biogenesis [BR:
srd03029
]
SD10_18360 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srd04147
]
SD10_18360 (groEL)
Enzymes [BR:
srd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SD10_18360 (groEL)
Messenger RNA biogenesis [BR:
srd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SD10_18360 (groEL)
Chaperones and folding catalysts [BR:
srd03110
]
Heat shock proteins
HSP60 / Chaperonin
SD10_18360 (groEL)
Mitochondrial biogenesis [BR:
srd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SD10_18360 (groEL)
Exosome [BR:
srd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SD10_18360 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SD10_18360 (groEL)
Exosomal proteins of breast cancer cells
SD10_18360 (groEL)
Exosomal proteins of colorectal cancer cells
SD10_18360 (groEL)
Exosomal proteins of bladder cancer cells
SD10_18360 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Pho88
Motif
Other DBs
NCBI-ProteinID:
AKD56575
UniProt:
A0A0E3ZXQ4
LinkDB
All DBs
Position
4507354..4508994
Genome browser
AA seq
546 aa
AA seq
DB search
MAKKIFFDTEARERIKKGVDTLADAVKVTLGPKGRNVILDKKFGSPVITKDGVTVAKEIE
LKDAMENMGAQLVKEVASKTADSAGDGTTTATVLAQAIYSIGAKNVAAGANPMDLKRGID
KAVVTVVKNLAEQAQTIGDDFGKIEQVATISANHDEEIGKMIAEAMKKVGKEGVITVEEA
RGTETEVKTVEGMQFDRGYLSPYFVTNTEKMEVELERPFILISEKKVSSMKELLPVLEQV
AQTGRPLLIIAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEERGFKLENASIEYLGQAEKILIDKDNTTVVNGVGEKENITGRVNQIKAQIENTTSDY
DREKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVTGGGIALI
RAISSLDAINAINEDEKTGINIIRVALESPLRTIVANAGGEGSVIVNKVKDGQGGYGYNA
KNDTFEDLFAAGVIDPKKVTRLALENAASIAGLLLTTECVIADEPEEAPAGGGHGHPGGG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaaatatttttcgataccgaagctcgtgagcgcattaagaaaggggttgat
acccttgccgacgcagttaaagttaccctcggacctaagggccggaacgtcattctggac
aaaaaattcggctcacctgttatcaccaaggatggtgtaacggtagcaaaagaaattgaa
ctgaaggatgccatggaaaacatgggagctcagttagtaaaagaagtagcgtcgaaaaca
gctgattcggctggtgatggtaccacgacagccaccgtactggcgcaggcgatctattcg
atcggcgcgaaaaacgtagcggctggtgccaacccaatggacctgaagcgcggtatcgat
aaagcagtggtaacggttgttaaaaacctggctgaacaggctcaaaccattggtgatgat
ttcggcaaaatcgaacaggtagcaaccatctcggctaaccacgacgaagaaatcggtaaa
atgattgccgaagccatgaagaaagttggcaaagaaggcgtcattacggttgaagaagcg
cgcggaacggaaacggaagtgaaaaccgtagaaggtatgcagttcgaccgtggctattta
tctccttacttcgtcacgaacacggagaaaatggaagttgaactggagcgtccgttcatc
ctgatctcggagaaaaaagtttcgtcaatgaaagaattgctgcctgtgctggagcaagtt
gctcaaacaggccgcccactgctgatcattgctgaagatgtagatggcgaagcactggct
acgctggttgtaaacaaaatccgtggcgcgctgaaagtagctgccgttaaagcacctggc
tttggcgatcgccggaaagcgatgctggaagacattgctatcctgacgggtggccaggtt
atcagtgaagaacgtggtttcaaactggagaacgcatcgatcgaatacctgggccaggct
gaaaaaatcctgatcgacaaagataacacgactgttgtcaacggtgttggtgagaaagaa
aacatcacaggccgcgtcaatcagatcaaagcccaaatcgaaaacacgacatcagactat
gatcgcgagaaattgcaggagcgtctggccaaactgtcgggtggtgtggctatcctctac
atcggtgcagctaccgaagtagaaatgaaagagaagaaagaccgcgttgacgacgccctg
cacgcaacccgcgcagccgttgaagaaggtatcgtaaccggtggtggtattgctctgatc
cgggcgatctcttctctggacgctatcaacgctatcaacgaagatgaaaaaaccggtata
aacatcatccgtgtcgctctcgaatcaccgctacggacaatcgttgccaacgctggtggc
gaaggttcggttattgtgaacaaggtgaaagatgggcagggtggttatggctacaatgct
aagaacgatacgttcgaagacctgttcgctgctggtgttatcgacccgaaaaaagtgacc
cgtcttgcgctggaaaacgcagcgtctattgctggtctgttactgacaacggaatgtgtt
atcgccgacgagccagaagaagctccagccggtggtggccatggtcacccaggcggtggc
ggcatgggcggcatgatgtaa
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