KEGG   Spirosoma radiotolerans: SD10_18360
Entry
SD10_18360        CDS       T03819                                 
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
srd  Spirosoma radiotolerans
Pathway
srd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:srd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SD10_18360 (groEL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srd03019]
    SD10_18360 (groEL)
   03110 Chaperones and folding catalysts [BR:srd03110]
    SD10_18360 (groEL)
   03029 Mitochondrial biogenesis [BR:srd03029]
    SD10_18360 (groEL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:srd04147]
    SD10_18360 (groEL)
Enzymes [BR:srd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SD10_18360 (groEL)
Messenger RNA biogenesis [BR:srd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SD10_18360 (groEL)
Chaperones and folding catalysts [BR:srd03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SD10_18360 (groEL)
Mitochondrial biogenesis [BR:srd03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SD10_18360 (groEL)
Exosome [BR:srd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SD10_18360 (groEL)
  Exosomal proteins of other body fluids (saliva and urine)
   SD10_18360 (groEL)
  Exosomal proteins of breast cancer cells
   SD10_18360 (groEL)
  Exosomal proteins of colorectal cancer cells
   SD10_18360 (groEL)
  Exosomal proteins of bladder cancer cells
   SD10_18360 (groEL)
SSDB
Motif
Pfam: Cpn60_TCP1 KH_PARP14_2 Pho88
Other DBs
NCBI-ProteinID: AKD56575
UniProt: A0A0E3ZXQ4
LinkDB
Position
4507354..4508994
AA seq 546 aa
MAKKIFFDTEARERIKKGVDTLADAVKVTLGPKGRNVILDKKFGSPVITKDGVTVAKEIE
LKDAMENMGAQLVKEVASKTADSAGDGTTTATVLAQAIYSIGAKNVAAGANPMDLKRGID
KAVVTVVKNLAEQAQTIGDDFGKIEQVATISANHDEEIGKMIAEAMKKVGKEGVITVEEA
RGTETEVKTVEGMQFDRGYLSPYFVTNTEKMEVELERPFILISEKKVSSMKELLPVLEQV
AQTGRPLLIIAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEERGFKLENASIEYLGQAEKILIDKDNTTVVNGVGEKENITGRVNQIKAQIENTTSDY
DREKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVTGGGIALI
RAISSLDAINAINEDEKTGINIIRVALESPLRTIVANAGGEGSVIVNKVKDGQGGYGYNA
KNDTFEDLFAAGVIDPKKVTRLALENAASIAGLLLTTECVIADEPEEAPAGGGHGHPGGG
GMGGMM
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggctaagaaaatatttttcgataccgaagctcgtgagcgcattaagaaaggggttgat
acccttgccgacgcagttaaagttaccctcggacctaagggccggaacgtcattctggac
aaaaaattcggctcacctgttatcaccaaggatggtgtaacggtagcaaaagaaattgaa
ctgaaggatgccatggaaaacatgggagctcagttagtaaaagaagtagcgtcgaaaaca
gctgattcggctggtgatggtaccacgacagccaccgtactggcgcaggcgatctattcg
atcggcgcgaaaaacgtagcggctggtgccaacccaatggacctgaagcgcggtatcgat
aaagcagtggtaacggttgttaaaaacctggctgaacaggctcaaaccattggtgatgat
ttcggcaaaatcgaacaggtagcaaccatctcggctaaccacgacgaagaaatcggtaaa
atgattgccgaagccatgaagaaagttggcaaagaaggcgtcattacggttgaagaagcg
cgcggaacggaaacggaagtgaaaaccgtagaaggtatgcagttcgaccgtggctattta
tctccttacttcgtcacgaacacggagaaaatggaagttgaactggagcgtccgttcatc
ctgatctcggagaaaaaagtttcgtcaatgaaagaattgctgcctgtgctggagcaagtt
gctcaaacaggccgcccactgctgatcattgctgaagatgtagatggcgaagcactggct
acgctggttgtaaacaaaatccgtggcgcgctgaaagtagctgccgttaaagcacctggc
tttggcgatcgccggaaagcgatgctggaagacattgctatcctgacgggtggccaggtt
atcagtgaagaacgtggtttcaaactggagaacgcatcgatcgaatacctgggccaggct
gaaaaaatcctgatcgacaaagataacacgactgttgtcaacggtgttggtgagaaagaa
aacatcacaggccgcgtcaatcagatcaaagcccaaatcgaaaacacgacatcagactat
gatcgcgagaaattgcaggagcgtctggccaaactgtcgggtggtgtggctatcctctac
atcggtgcagctaccgaagtagaaatgaaagagaagaaagaccgcgttgacgacgccctg
cacgcaacccgcgcagccgttgaagaaggtatcgtaaccggtggtggtattgctctgatc
cgggcgatctcttctctggacgctatcaacgctatcaacgaagatgaaaaaaccggtata
aacatcatccgtgtcgctctcgaatcaccgctacggacaatcgttgccaacgctggtggc
gaaggttcggttattgtgaacaaggtgaaagatgggcagggtggttatggctacaatgct
aagaacgatacgttcgaagacctgttcgctgctggtgttatcgacccgaaaaaagtgacc
cgtcttgcgctggaaaacgcagcgtctattgctggtctgttactgacaacggaatgtgtt
atcgccgacgagccagaagaagctccagccggtggtggccatggtcacccaggcggtggc
ggcatgggcggcatgatgtaa

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