Spirosoma radiotolerans: SD10_19140
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Entry
SD10_19140 CDS
T03819
Name
(GenBank) collagen-binding protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_19140
Transporters [BR:
srd02000
]
Other transporters
Pores ion channels [TC:
1
]
SD10_19140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
MetallophosN
Big_1
CooC_C
Motif
Other DBs
NCBI-ProteinID:
AKD56700
UniProt:
A0A0E3ZXY6
LinkDB
All DBs
Position
4720545..4723775
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AA seq
1076 aa
AA seq
DB search
MKKHLLPRRMLGRLLKTSSTQLLLAFTCVSFTYANNSFERNPYVNHPEIRADRTLTGRVT
DEKDEALPGVSVILKGSQRGTVTDADGRYKLDVPDNGSTLVFSFVGYLSQEVRIGNQTAV
DISLKADSKVLDEIVVIGYGTTKKSDLTGAVSGVKEAQLQERPAPSLNQALSGRMPGVQV
NTNSGRPGGRTTIRIRGFSSINSSNNPLYVVDGVMLPQGTGDQFSNPIDYINPNDIVNVE
VLKDASSTAIYGARGANGVILVSTRKGKAGESRVTYDSQFSVNTIGPNKPKVLNAKEYLA
TEDLAYANMAKYDPVGWAAGKWSYLDPKVRRTAFSAAHPGVFDANLNPLYDTDWFKESSQ
NKLSQNHQLGFSGGNERTQYSLSLNYRDDQGLIKTSYMKRYSGRFSIDDQVKSWLKIGGT
MSYNYQTENLVDINDAVARQIVEDFPFLPVRYPDTGVFAENRDYPYAEGTMSSVHRLMDR
KYIQNTQTILGSLFTNITFGKGLEMRTVLGTNIQTQEINQSQTRTLNIGNNGNASTNSNR
QNFWSLENYLTYNKQIGQDHSFTGLLGLSWQETNTFGFGASVSGFATDYFTYNNLGAGAI
NPSVSSGATRFAFNSYFGRINYGYKNKYLFTATGRADGSSKFGENHKFAFFPSAALAWRI
SEEDFLKGNSLISNLKLRTSYGLTGNSEIPPYSSLSLLSSNYATIYNDTKVSGTGINRLA
NPDLRWEKTAQTDVGLEIGLFKGRVTLEADYYYRLTTDMLLDAPVPRTSGYATIRRNVGS
MENKGFEFGLNTVNISRGQFSWNTTFNISLNRNKVLSLATPSDIFNVGGPNFTNPTNIIR
VGEAVGSFWGLTRAGVWSEAEREEAAKFTSYRNGLTILPGDIKYLDVNGDKAITDADRSI
IGNGSPKGWGAMTNNIRFGNFDATLELQYMFGNKVMLMNLHASEDRQALANSYASVLGAW
TPTNQGSQIAEVRDTRAGYVTNVDSHWIKDGSFLRGKNLLFGYTLPVAVTNKLKLSRLRV
YVSSQNFFLLLKDPIVGDPEVTPTNQGTDNSAFSQGMIWHNYPKPTTYLLGLQIGL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacacttacttccccgacgaatgctgggcagactattaaaaacatcaagtact
caattgctgctggcatttacctgtgttagttttacctatgcaaacaactcgtttgagcgg
aatccctacgtaaatcatcccgaaatccgtgctgacagaaccctcaccggtcgagttacg
gatgaaaaagatgaagccctacccggtgttagtgttattctaaaaggaagccaacgcgga
acggttacagatgctgatggtcgttataaattagacgtacccgacaatggctcgaccctt
gtgttttcatttgttgggtatctctcgcaggaagtgcgtatcggcaaccaaacagcggtc
gatatcagcctgaaagcagacagcaaagtactcgacgagattgtggttattgggtatggt
accacgaagaaatcagaccttaccggagccgtatctggcgttaaagaagcgcagttgcag
gaacggcctgccccatcgctgaaccaggcgctctcgggtcggatgccgggtgtgcaggta
aacaccaactcgggtcgtcctggtggtcgtacaactatccgcattcggggttttagctcc
atcaactcgtcgaacaacccactttatgtggtcgatggcgttatgcttccacagggtacc
ggcgatcagttcagtaacccaatcgactacattaacccgaatgacattgtcaacgttgag
gtactgaaagatgcctcatcgacggctatttatggcgcacgtggagccaacggcgttatc
ctggtatcgactcgtaaagggaaagccggtgaaagccgcgttacctacgatagccagttc
agcgtaaacaccatcggtccaaacaaaccaaaagttctgaacgcaaaagaatacttagct
actgaggatctggcgtatgccaatatggcgaaatacgatcccgtcggctgggcagctggc
aaatggtcttacctggaccccaaggttcggcggacggcttttagcgcagcgcatccgggc
gttttcgatgcaaacctgaacccattatacgataccgactggttcaaagaatcgtcacag
aacaaattatcgcaaaatcaccagttaggctttagtggtggtaatgaacggacacagtat
tcactttcgctaaactatcgggatgatcagggtctgatcaaaacgtcgtacatgaaacgg
tactcgggccgcttctcgattgacgatcaggtgaaaagctggctgaaaattggcggtacg
atgagctacaactaccagacggaaaacctggtggatatcaatgacgctgtagcccggcaa
attgtggaagactttccgttcctgcccgttcggtaccccgacacaggtgtgttcgctgaa
aaccgcgattatccatacgctgaaggtacgatgagttcggttcaccgcctgatggatcgc
aaatacatccagaatacccaaacgattctgggtagcctgttcacgaacatcacgtttgga
aaagggctggaaatgcgcaccgttttgggtacgaacattcaaacccaggaaatcaaccag
tcgcaaacccgtaccctgaacattggcaacaacggtaacgcatcgaccaatagtaaccgg
cagaatttctggtcgttggaaaactacctgacttataataagcagatcggtcaggaccat
tcgtttacgggcttattgggtctatcctggcaggaaaccaacacatttggctttggtgcc
agtgtgagtggattcgctaccgactactttacctacaataacttaggggctggcgcgatc
aacccatcagttagctcgggggcaacgcggtttgcgttcaactcctattttggccggatc
aactatggttacaagaataagtacctgttcaccgcaaccggacgtgccgatggctcatcg
aagttcggtgaaaaccacaaatttgctttcttcccttcggcagctttagcctggcgtata
tcggaagaagacttcctgaaaggcaactcgctgatttcaaacctgaaactacggactagc
tatggcttaacaggtaactctgaaattccgccttattcgtcattatcgctgctgagctca
aactatgccaccatttacaacgatactaaagtgagtggaacgggcatcaaccgtctggcc
aaccctgatcttcgttgggagaaaacggcgcaaaccgatgtaggtctggaaattggtctg
ttcaaaggccgcgtgacgttagaagcggattactactaccgcctgaccaccgacatgctg
ctcgatgctccggttccacgtaccagcggttacgctacgattcgccggaacgtcggttcg
atggaaaacaaagggttcgaatttggtctgaacacggtgaacatcagccggggtcagttt
agctggaacacaacgttcaatatttcgctcaatagaaataaagttttatcgctggcaacg
ccttccgacatcttcaacgtgggtggtcctaacttcaccaacccaacgaacataatccgg
gtcggcgaagcggtgggttcgttctggggtttaacccgtgcaggtgtatggagtgaagca
gagcgcgaggaagcggccaagtttaccagctatcgcaacggcctgactattctgcccggc
gacatcaaatacttggacgtaaatggcgacaaagccatcacggatgctgaccgtagtatc
atcggtaacggtagccctaaaggctggggtgccatgacaaacaacatccggttcggtaac
ttcgatgccacccttgaactccagtatatgttcggcaacaaagttatgttgatgaacctc
cacgccagcgaagaccggcaggctctggctaacagctacgcatctgtgctgggtgcctgg
acgcctaccaaccaaggcagccagattgccgaagtacgggatacgcgggctggttatgtg
accaacgtagacagtcactggatcaaggatggctcattcctgcgtggcaaaaacctgctg
ttcggctatacgctcccagttgccgtaacgaacaagcttaagttgagccgcttgcgcgtg
tatgtttcttcgcaaaactttttccttctcttgaaagatccaatcgttggcgatcctgaa
gtaacaccaaccaaccagggaacggacaacagtgctttctcgcaaggcatgatctggcac
aactatccaaaaccaaccacgtatctgcttggtctccagattggattgtag
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