Spirosoma radiotolerans: SD10_20385
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Entry
SD10_20385 CDS
T03819
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_20385
Transporters [BR:
srd02000
]
Other transporters
Pores ion channels [TC:
1
]
SD10_20385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TonB_dep_Rec_b-barrel
STN
CooC_C
FecR_C
Dockerin_1
TTR_TEN1-4
Big_1
EF-hand_5
APC_15aa
EF-hand_1
Motif
Other DBs
NCBI-ProteinID:
AKD56917
UniProt:
A0A0E3V8N6
LinkDB
All DBs
Position
5014076..5017714
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AA seq
1212 aa
AA seq
DB search
MTIRIQKQQKLLKIMRVSFYLFFVVTAFATIARAHDTYGQELLNRRVSLQLSNLTIEQAI
SRIGKEADVKFMYNPRIFTQQRISSLTFTNERLSEVLNAVLGPAAINYEVGGKTIILKRA
ADASSTSSRAVADPNVEKPVPPITVTGRVLDEKGTGLPGATILVKGTANVGTATDADGRF
TLNVPDGNGTLVISSISYTTQEVAINNRTTLPDIQLASDVKSLSEVVVVGYGTQRKKDLT
GAVSVVNVTELQQQPTAQITNQLQGRASGVTVLGSGQPGEAPQIRIRGLNTFGNNQPLYV
VDGVPTQNINDINPNDVASMQVLKDAGSASIYGSRAANGVIIITTRRGNGKVKVQYDAYY
GTQIPKGGNVWHLLNPQETAQLKFNALRNANPNAAINDPLYGSGTTPVLPDYIAPQGAKE
GDPSVDPSRYNVNPTYNDASQYNAFNRITRANKTGTDWFHEIFKAAPIMSHNLAVSGGGP
QGNYLFSFNYFNQQGTLINTYLKRYTIRSNSQYNLRENIRVGENIAFSVSDNPRVNALQE
GSAIGMAFREQPIIPVYDIAGNYAGGYGQGLGNANNPVAVQQRTVNNRGLNNRLFGNMYA
EVDFLKDFTARTSFGGEIYMGNFHSFTYPTYENQENTTTNSYTENTFNGSNWTWTNTVQY
QHNFNNTHDLKVLVGTEAYQNQGRNVGGTTQSYFSFDPNFTNLSTGSGTPTNYSNRYADA
LFSLIGRVDYSLKDKYLFGATIRRDGSSRFLNYQYGWFPAVSAGWRISQENFMSGLTWLN
DLKIRGGYGIMGNQLNVDPANAYTTYGGDRTSSYYAISGSNSANSLGFQRTRIGNPDARW
EKNINANIGFDASLWKGKLDLTVDYYNKQVRDLLYTLELAGTAGLGTAPAVNVARMRNQG
LDIAASSAINVSSDLKLTGTLTFTTYNNKIVSLADGIDYFDQEGRRFNGSYIVRNAVGHS
IGQFFGYKTAGFWNSQEEINAANAQAQQKTGNTSAVYQSDVAVGRFRYADVNGDGQITEA
DRTFLGNPNPKFSYGLNLGATYKKFDFSIFFYGTQGNDIWNNVRWWTDFNANFQGAKSQT
ALYDSWTPENHDAKAPIQETVGSFSSSNVPNSYFVENGSYLRAKNAQLGYTLPANTLKKL
GIERLRVYVQSANLFTITKYSGLDPEIGTTANTNNSSGGSLNQSFSNTTSFGIDEGVYPN
QRQFLFGLNVTF
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcgaatacaaaagcagcaaaagctgctcaaaattatgcgcgtcagtttttac
ctgtttttcgtggtgactgcctttgcgaccatagcaagagcacacgacacgtatggtcag
gaattacttaatcgccgggtgagccttcagctatccaatctgaccattgagcaggccatt
agccgcattggcaaagaagctgatgtgaagttcatgtataacccgcgcatttttacccaa
caacggatcagctcgcttacgtttaccaacgagaggctttcggaggtactcaacgccgtg
ctggggcccgctgccattaactatgaagttgggggtaaaacgatcattctgaaacgggcc
gccgatgcctcatcaaccagttcacgcgcggtagccgacccaaacgtcgaaaaacccgtt
ccgcctattaccgtcacgggccgggttctcgatgaaaaagggacgggtttgccaggggca
accattctggtcaaaggaaccgccaatgtcggtacggcaacggacgccgatgggcgcttt
accctgaacgtaccagacggcaacggaacgctggtcatctcgtcgatcagctatacaacg
caggaggtggcgatcaacaaccgcactaccctacctgatattcaactggcatctgatgtg
aagtcattgagcgaagtagtcgtggttgggtatggtacacagcgcaagaaagacctgaca
ggggctgtctcggtcgttaacgtaacggagttacaacaacaaccaacggcgcaaattacc
aaccagttacagggccgggcgtcgggcgttacggtgttgggatcgggtcagccgggtgaa
gctccccagattcgtatccgggggttgaatacattcggtaataaccagccgctctatgtg
gtggacggcgtgcctacacagaacatcaacgacatcaacccgaacgacgttgcttctatg
caagtgttgaaagatgccggttcggcgtcgatttatggttcacgggccgccaatggtgtc
attatcatcaccactcgtcgtggaaacggtaaagttaaggttcagtacgatgcgtattac
ggaacgcaaattccaaaaggcggcaacgtttggcacttgctaaatccgcaggaaacggct
cagttgaagtttaatgccctgcgcaatgccaaccccaatgcagccattaacgatccgctg
tacggcagcggcacgacccccgttttgccggattacattgctcctcaaggtgccaaagaa
ggtgacccttccgttgacccatcgcggtacaatgtgaatccgacctacaacgatgcttcg
cagtacaacgcgtttaaccggattacacgggctaataaaaccgggacggactggttccac
gagattttcaaagcagcgccaattatgagccataacctggccgttagcggtgggggccca
caaggtaattacctgttctcgttcaactatttcaaccagcagggtacgctgatcaatacg
tatctgaagcggtacacgatccggtcaaacagccaatacaaccttcgggagaacatccgg
gtaggtgaaaatatcgccttttcggtgtcggacaacccacgcgtcaacgccctgcaggaa
ggtagcgccattgggatggcgttccgcgagcaacccattattcctgtctatgatattgcc
ggaaactatgccggggggtatggccagggattgggcaatgccaacaacccggttgccgtt
cagcagcgcaccgtcaataaccgggggctgaacaatcggcttttcggtaatatgtatgct
gaagtcgactttctgaaagacttcacggcccggaccagtttcggcggtgaaatctacatg
ggtaacttccattcctttacctatcctacgtatgagaaccaggaaaataccacgaccaac
tcgtacacggaaaataccttcaacgggtcgaactggacatggaccaacaccgtccagtat
cagcacaatttcaacaatacgcacgatctgaaggtgttggtgggtacagaagcataccag
aatcagggccgtaacgtagggggcacaacacagagctatttctcgttcgacccgaacttc
actaacctttcgacggggtcgggaacgccaacgaactacagtaaccgctatgcagatgcc
ctgttctcactgattggccgggtcgattactcgctaaaggacaagtatctgtttggcgca
acaattcggcgcgacggctcatcccgttttctgaattaccagtatggctggttcccggcg
gtgagtgcgggctggcggatttcgcaggaaaatttcatgagcggactgacctggttaaat
gatctgaaaattcgcggaggctacggcatcatgggtaaccagttgaacgttgacccagcc
aatgcctacacaacctacggtggtgaccgcacatcgtcttactacgccatatcgggctcc
aattcggctaactcgctcggttttcagcgcacccgcatcggtaaccccgacgcgcgctgg
gagaagaacatcaacgctaacatcggctttgatgccagcctgtggaaaggcaagctggac
ctgaccgttgattattacaacaaacaggttcgcgatctgctctacacgctcgaattggcc
ggaacagccggtttaggcactgcgcccgcggttaacgtagcccggatgcgaaaccagggt
cttgacattgcggcatcgagcgctattaacgtatcgagcgatctgaaactgaccggaacg
ttgaccttcaccacctataacaacaagattgtttcgctggcggatggcatcgactacttc
gatcaggaaggccgccggttcaacggaagctacattgttcgcaatgccgttggtcattcg
attggtcagttctttgggtacaagaccgctggtttctggaactcgcaggaggaaatcaac
gcagcgaacgcgcaggcacaacagaagacgggtaataccagtgctgtttaccagagtgat
gtggccgtgggccggttccgctacgccgacgtgaacggcgatggccaaattaccgaagcc
gaccgcactttcctgggcaacccaaacccgaagttcagctacggtctgaacctgggggcg
acttataagaagttcgatttcagcatcttcttctacggtacgcagggcaacgacatctgg
aacaacgtacgctggtggaccgatttcaacgccaacttccagggtgccaagagccagacc
gctctgtatgattcctggacaccggaaaaccacgatgccaaagcaccgatccaggaaacg
gttggttcgttcagttcgtctaacgtacccaactcttatttcgtcgaaaatggctcgtac
ctgcgggctaaaaacgcgcagctcggctacacgctgcccgccaacacgctgaaaaagctg
ggtatcgagcgcctgcgggtttatgttcagtcggccaacctgtttacgatcaccaaatac
tcgggtctggatcctgagattggcactacggccaacacgaacaacagttcgggcggtagt
ttgaatcaatcgttctcgaacaccacttcgttcggtatcgacgagggcgtgtatcctaac
cagcgtcagtttttattcggtctgaacgtgacgttttaa
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