Spirosoma radiotolerans: SD10_23930
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Entry
SD10_23930 CDS
T03819
Name
(GenBank) RNA-binding protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srd03009
]
SD10_23930
Enzymes [BR:
srd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SD10_23930
Ribosome biogenesis [BR:
srd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SD10_23930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AKD57486
UniProt:
A0A0E3V9U8
LinkDB
All DBs
Position
complement(5894423..5896312)
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AA seq
629 aa
AA seq
DB search
MSQDSEQNDRGGRPNRDGDPQRRDGRSFGRRDDARSSGPTGSRTNSDRSDDRPRFSRDNN
DRPKFNRPADGDRPRFNRDDRNSGPRSTDSRDSGSSSRPFRPAGSRDNNRNDGPRNDGPR
NDGPRFDRGQNDRPKFNRPADGDRPRFSRDNDRSTFNRPADSDRTGGSSRDNDRPKFNRP
NDGDRPRFNRDDRTYRPASAGPRSDKPAGTPRFNREDRPDQRNRDTDSPRFSNDRSRSND
RFGSERPKREDRPDGDRPRINRSDSSRSNDRRSDSRSTGSSRFSRDGGSARPDKPAFKRV
GGFSREADERNRFGSADQERNNRRNDGPRNDGPRNDWDTESRFTGKQRKESGDRRTGNYT
KAPDYNLEQTRAADTFKRSRSDDKRQSDHNDGPGTTRLNRYIANSGVCSRREADELIARG
DISVNGKVVTEMGYKVKEGDTVKYGTKVLNPERFVYVLLNKPKDYITTTEDPEERKTVME
LVADAGNFRMYPVGRLDRNTTGLLLVTNDGELADKLTHPSNNIRKIYQVELDKPITEEHL
NAIKQGIELEDGPIKPDAVSIVTPDAYVVGIEIHSGRNRIVRRIFESLGYEVTKLDRTTY
AGLTKKELPRGKWRFLDPKEVVKLKYLNA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagattcagaacagaacgatcggggaggcagaccaaaccgtgatggtgatccg
caacggcgggacggtcgttcattcgggcgtcgggatgacgcccgctccagtggtccaacg
ggatcacgcacaaattcggaccggagtgatgatcgcccccggtttagtcgggacaacaac
gaccgcccgaaattcaatcgccctgctgatggcgatcggccccgctttaatcgagacgac
cgcaacagtggaccacgtagtaccgattcgcgcgactccggatcatccagccgacctttc
cggccagccggatcacgcgataataaccgtaatgacggaccacgtaatgacggaccacgt
aatgacggaccacgctttgatcgtggtcagaatgatcgcccaaaatttaaccgtcctgcc
gatggtgaccgccctcggtttagtcgggataatgaccgttctacgtttaatcggcctgct
gacagtgatcgcacgggaggtagtagccgggataatgaccgcccaaaattcaatcggcct
aatgatggcgatcggcctcgctttaaccgggacgaccgcacctatcggccagccagtgcc
ggaccgcgcagcgataagcccgccggtacaccacgcttcaaccgggaagatcgtccggac
caacgtaaccgggatacagactctccgcgtttttcaaatgatcggagccgtagcaatgat
cgtttcggcagcgagcgtccgaaacgggaagatcgtccagatggggatcgcccacgcata
aatcggagtgattcttctcgttcgaatgaccgtagaagcgattcccgcagtacgggttcg
tcccgtttttcgcgcgatggcggatcggccagacctgataaaccagctttcaagcgggtg
ggtggtttcagccgcgaagccgatgaacgaaatcgatttggcagcgccgatcaggagcgg
aataatcgccgtaatgacggaccacgtaatgacggaccacgtaatgattgggataccgaa
agccggtttacgggtaagcaacggaaagaatctggtgatcggcgcacgggcaattacacg
aaagcccccgattataatctggagcagacccgcgctgccgacacgtttaaacggagtcgg
tcagatgacaaacgccagtcagatcataacgacggaccaggaacgactcgtctgaatcgg
tatatcgccaattcgggtgtttgttcccgccgggaagctgatgaactcattgcccgaggt
gatatttcagtaaacggcaaagtggtaactgagatgggttataaggtgaaagaaggcgat
acggttaagtatggtacgaaggtgctgaatcctgagcggttcgtgtatgtactgctgaat
aaaccgaaagattacattacgacgaccgaagatcccgaagagcgcaaaaccgtaatggag
ttagtagctgatgcgggcaacttccggatgtatccggtcgggcgcctggaccgcaacaca
acgggtctcttgctggtaaccaatgacggtgaactggccgataaactgacgcacccatcg
aacaacatccgtaaaatctaccaggttgagttggataaacccatcacggaggagcacctg
aatgccatcaagcaaggcattgaactggaagatggcccgattaagcccgatgcagtaagt
attgtcacgcctgatgcctatgtcgtggggattgaaattcattcgggtcgtaaccgtatt
gtgcgccggatattcgaaagccttggttatgaagtaactaagctcgatcgtacaacctat
gccggtttgaccaagaaagagttgccccgtggtaaatggcgcttcctcgatccgaaggag
gttgtaaagctgaagtacctgaacgcataa
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