Spirosoma radiotolerans: SD10_24815
Help
Entry
SD10_24815 CDS
T03819
Name
(GenBank) beta-lactamase
KO
K18988
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:
3.4.16.4
3.4.21.-]
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
srd01002
]
SD10_24815
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srd01011
]
SD10_24815
Enzymes [BR:
srd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SD10_24815
Peptidases and inhibitors [BR:
srd01002
]
Serine peptidases
Family S12: D-Ala-D-Ala carboxypeptidase B family
SD10_24815
Peptidoglycan biosynthesis and degradation proteins [BR:
srd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SD10_24815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-lactamase
TPR_2
TPR_1
TPR_12
TPR_14
TPR_8
TPR_7
Motif
Other DBs
NCBI-ProteinID:
AKD57636
UniProt:
A0A0E3V9Z4
LinkDB
All DBs
Position
6129887..6131359
Genome browser
AA seq
490 aa
AA seq
DB search
MNQLFAAVCLLVLQPALVQAQSAITNARAEATIQQLGTAFVQEKSHVGLSIGIIRNGKTS
FYTFGTTEKGKNQLPTENTIYEIGSITKTFGSLLLARAVLDQRVRLDDDIRQYLDGDYPN
LAYEGKPIRLVHLTNWTSELPDNFPDKPDAYKQVPQDSIPFRIMNGLSQYTRQDFFNDLH
AVTLKAAPGQNPRHSNVAAQLLGYILEKIYQMPYDELIKTQIEQPLAMRNTFSLPQSADQ
FAIGYSGNGVQMPAFTLKAMQAAGGLRYSTADLLKYAAYQLDERDPAVKLSHQTTWGSPD
SQAFGLNWFLHKTIDSKRQIEHSGGTFGFASYCDLYPDQKTALVLFANNSDQTTQGQLGE
LSKKIMDALYGEPAALTALKDALKKRGYAQVINVVKDVHKKHPELHLNENYVNNWGYSLV
GQGKLQEALAIFKLNVSLYPTGWNTYDSLAETYERIGNRKLAIDNYTRSLALNPNNTNAT
EFLKKNGEGK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaattattcgctgccgtttgcctactggttctacagccagctcttgttcaggct
cagtcggccataacaaatgcccgcgctgaagcgactattcagcaactgggaaccgcgttt
gttcaggaaaagtcgcatgtgggattgtccatcgggatcatccggaatggaaagacatcg
ttctatactttcggtacgacggagaaaggcaaaaatcagttaccgacggagaatacgatt
tatgaaatcgggtcgatcaccaagacgtttgggagcctactgctggcaagggccgttctc
gaccagcgcgtccggctcgacgacgacatccgccagtacctcgatggcgactatccgaat
ctggcctacgaaggcaaacccattcgattggtacacctgaccaactggacgtccgaatta
ccggacaacttcccggataagcccgatgcctacaagcaggtaccccaggattcgattcca
ttccgcattatgaatgggttaagccaatatacccggcaggatttcttcaacgatttgcac
gccgttaccctcaaggcggcacccggccaaaatccccgtcactccaacgtagcggctcaa
ttgttgggttatattctggagaaaatctaccagatgccctacgatgagttgatcaaaacg
cagattgagcagccgcttgccatgcggaacacctttagtttgccacaatcagcggatcag
tttgcgataggctacagtggaaatggcgtccagatgcctgcgtttacgctgaaagccatg
caggcagccggtggccttcgctacagtacagccgatttgctgaagtatgccgcctatcag
ttggatgagcgagacccggccgtgaagctgagccatcaaactacctggggtagccccgac
agtcaggcctttggcttaaactggtttctccacaaaaccatcgacagcaaacgacagatc
gaacactcaggcggtacgttcggctttgccagttactgcgacctatatccggatcagaaa
acggcccttgtgttattcgccaacaactcggatcaaacaacacagggccagcttggtgaa
ctgtcaaaaaaaataatggacgcgctctatggagaaccggccgccctgacagcgctgaag
gacgcgttgaaaaaacgaggctatgcacaggtgatcaatgtggtgaaggatgtccataaa
aagcatccggaactccatttgaacgaaaattacgtgaataactggggttactcactggtc
gggcagggtaaacttcaggaggcactcgccatcttcaagctgaatgtcagcctttatccc
actggctggaatacctacgacagcctggctgaaacctacgagcgaatcggcaaccgcaaa
ctggccatcgataattatacccggtcgctggccttgaacccgaacaataccaacgctacc
gaattcctcaaaaaaaacggcgagggtaagtaa
DBGET
integrated database retrieval system
