Spirosoma radiotolerans: SD10_24975
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Entry
SD10_24975 CDS
T03819
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
srd
Spirosoma radiotolerans
Pathway
srd00061
Fatty acid biosynthesis
srd00071
Fatty acid degradation
srd01100
Metabolic pathways
srd01212
Fatty acid metabolism
srd02024
Quorum sensing
srd04146
Peroxisome
Module
srd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SD10_24975
00071 Fatty acid degradation
SD10_24975
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SD10_24975
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD10_24975
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
srd01004
]
SD10_24975
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
srd04147
]
SD10_24975
Enzymes [BR:
srd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SD10_24975
Lipid biosynthesis proteins [BR:
srd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SD10_24975
Exosome [BR:
srd04147
]
Exosomal proteins
Exosomal proteins of breast milk
SD10_24975
Exosomal proteins of breast cancer cells
SD10_24975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AKD57659
UniProt:
A0A0E3ZZG8
LinkDB
All DBs
Position
6173051..6174754
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AA seq
567 aa
AA seq
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MNTESTINPYPWRRFYPKGVPDEINPDAYTSLAALLEEGCRRFTDRPAYACMGKQITFGE
LDHLSAQFASFLQNDLKLQKGDRIAIQMPNTLQYPIAMFGALRAGLAVVNTNPLYTPREM
QHQFKDSGTKAIVILSNFASNLAKILDRTEIQHVVITQLGDLLGFPKKQIVNAVVKYVKK
LVPAYNLPDAISFNDALSRGSSQPFKPVPIQNTDLAFVQYTGGTTGVSKGAMLTHRNIIA
NVEGQHFWMKPGGTPDGEGIIVAALPLYHVYALTTNALAALKSGSMNLLITNPRDLNAFI
DDLKKYRITAFTGVNTLYNGLLNHPRIGEVDFSSLKVTSAGGMALQTAVAERWTKLTGNT
PCEGYGLTETSPVLCSNPVDGSVRIGTIGVPWPSTDMKIIREDGTDANVGEAGEIVARGP
QVFLGYYKRPEETAQSMLGDWFKTGDIGVMNEDGFFKIVDRKKDMILVSGFNVYPNEIED
VVAQCPGVLEVACIGVPDEKSTEVVKIFVVKKDPNLDIETIKAYCRENLTPYKVPRIIEF
RTELPKSNVGKILRRPLRDEELAKLKK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagaatcgacaataaatccatatccctggcgccgtttttatccaaaaggcgtt
cctgatgagattaaccctgatgcttatacgtcactggccgctttgctggaagaaggatgc
cgacggttcacagatcggcctgcctatgcttgtatgggtaagcaaattacgtttggtgaa
ctggatcatttatccgcccagtttgcttcttttttacaaaatgacctgaaactccagaaa
ggagatcgcattgcgattcaaatgcccaatacgctccagtatcctatcgctatgtttgga
gcgctccgggcgggtctggcggtagtcaatacaaacccgctgtatacgccccgcgaaatg
cagcaccagtttaaagattcggggacaaaagcgatcgtcattctcagcaactttgccagt
aacctggcgaaaatcctcgaccggacagagatccagcacgttgtaattacgcaattgggc
gatttgctgggctttcccaaaaagcagatcgttaatgccgtcgtaaaatacgtgaagaaa
ctggttcccgcctataacctgcccgacgccatttcattcaacgatgcactgagccgggga
agcagccagccgttcaaacccgtaccgatccagaatacggatttagcctttgtgcaatat
acgggcgggacaacgggtgtttcgaagggggccatgctcacccaccgaaacattattgcc
aatgtagaagggcagcatttctggatgaagccaggcggtacgcccgatggtgagggaatt
atcgtggcggccctccccctctatcacgtatacgctctcacgacgaacgcactggcagcc
ttaaaaagcggttccatgaacttgctaattaccaacccgcgcgatttgaacgcctttatt
gacgatctaaaaaaatacaggattacggccttcacgggcgtcaatacgctctacaatggc
ctgttgaatcatccgcgcattggcgaagtcgacttcagttctctgaaagttacttcagcc
ggaggtatggctctacaaacggccgtagccgaacgctggacaaaactcaccggcaacacc
ccctgcgaaggctacggactcaccgaaacatcgcccgttctttgctcaaaccccgttgat
ggcagcgtacgtatcggcacaattggcgtcccctggcccagcaccgatatgaaaatcatt
cgtgaagacggcaccgatgccaacgttggtgaagcgggtgaaattgtcgctcgtgggccg
caggtgttcctgggttattacaaacgccccgaagaaaccgcccaatccatgctgggcgat
tggttcaagacaggcgacattggcgtcatgaatgaagatggtttcttcaaaatcgttgac
cgtaagaaagatatgatcctggtctcgggttttaacgtgtacccgaatgaaattgaggat
gtcgtagcgcagtgcccaggcgttctcgaagtggcctgcattggggtacccgacgagaaa
tcgacggaagtagtcaaaatattcgtcgtcaaaaaagatcccaacctggacatcgaaacc
atcaaagcttactgccgcgagaacctgacgccctataaagttcccaggattatcgagttc
cggaccgaattacctaagtctaacgtaggcaaaatccttcgccgacctctgcgggatgaa
gagttagccaaactaaagaaatag
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