Spirosoma radiotolerans: SD10_25390
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Entry
SD10_25390 CDS
T03819
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
srd
Spirosoma radiotolerans
Pathway
srd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SD10_25390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srd03021
]
SD10_25390
03400 DNA repair and recombination proteins [BR:
srd03400
]
SD10_25390
Enzymes [BR:
srd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SD10_25390
Transcription machinery [BR:
srd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SD10_25390
DNA repair and recombination proteins [BR:
srd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SD10_25390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Methyltrn_RNA_3
Motif
Other DBs
NCBI-ProteinID:
AKD57732
UniProt:
A0A0E3V9K0
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All DBs
Position
6246984..6247973
Genome browser
AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVVEKADDFHGVFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGVVEDVTEIILNLKMVRFKKINDMVDNKITVNIKKQSVLKAGDISKFSPS
FEVLNPELEICHIDDTRDLEMEIFVEKGRGYVPADEPRANELPFGHIPIDAIYTPIKNVK
YSVENTRVEQKTDYERLLLDIETDGSIHPEEALKGAAYILIQHFMLFSDQTMTFETAKPE
EENVVDEEVLHMRKLLKTSLADLDLSVRAYNCLKSADVRTLGDLVRLEISDMMKFRNFGK
KSLTELEQLVAEKNLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagcgttccaaatgcccgacaaagtcgtagtggagaaagctgacgacttt
cacggggtatttgaattcaaaccccttgaaaaaggatacggtgtaacaatcggcaatgcg
ctacggcgtattttgctgtcatctctggaaggatacgcgattaccagcgtaaaattcccc
ggtgtgttacacgagttttcatcaatcgagggcgtcgttgaagacgtgacagagatcatt
ctgaacctgaaaatggttcgcttcaagaagatcaatgacatggtcgacaacaagatcacc
gtcaacattaagaagcaatcggttctgaaagccggtgatatatccaagttctcgccatcg
ttcgaagtgctgaatccagaattggaaatttgccatatcgacgacacgcgggatctggaa
atggaaattttcgtggaaaaaggtcgtggctatgtaccagctgacgaaccacgggccaac
gagttacccttcggtcatattccaattgatgctatttacacgccaatcaaaaacgtgaaa
tatagcgttgaaaacactcgggttgagcaaaaaactgactatgagcggttactgctagac
atcgagacggatggatcgattcaccccgaagaagccctgaaaggtgctgcttatattctg
attcagcactttatgttgttctcagatcagacgatgacgtttgaaacggcgaaaccggaa
gaggaaaatgtagtcgatgaagaagtactgcacatgcggaaacttctgaaaacgtcgctg
gctgatctcgatctgtcagtacgggcttacaactgcctcaaatcggccgacgttcggaca
ttgggcgatcttgtgcggttagaaatttccgacatgatgaagttccgcaacttcggtaaa
aagtcgttgacggagcttgagcaacttgttgcagagaaaaacctgacgttcggtatggac
gttgcaaagtacagattagacgaagactaa
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