Spirosoma radiotolerans: SD10_26485
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Entry
SD10_26485 CDS
T03819
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
srd
Spirosoma radiotolerans
Pathway
srd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SD10_26485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srd03400
]
SD10_26485
Enzymes [BR:
srd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SD10_26485
DNA repair and recombination proteins [BR:
srd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SD10_26485
RecFOR pathway proteins
SD10_26485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
Mg_chelatase
nSTAND3
AAA_16
AAA_14
TIP49
NB-ARC
RNA_helicase
NTPase_1
NPHP3_N
TsaE
AAA_33
AAA_PrkA
DUF815
Bac_DnaA
AAA_18
ABC_tran
NACHT
AAA_24
Rad17
AAA_11
Sigma54_activ_2
bpMoxR
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AKD57919
UniProt:
A0A0E3ZZ96
LinkDB
All DBs
Position
complement(6496156..6497184)
Genome browser
AA seq
342 aa
AA seq
DB search
MRNDFLKGSGDGMTTTDKEIERALRPLSFEDFTGQAKILDNLEVFVRAAMQRGDALDHVL
LHGPPGLGKTTLSHIIANELNAGIKMTSGPVLDKPSDLAGLLTNLQPNDVLFIDEIHRLN
PIVEEYLYSAMEDYKIDIMLDSGPNARTVQIKLNPFTLIGATTRAGMLTSPLRARFGISA
RLEYYDAKLLTSIVQRSAAILGTPIDETGAYEIARRSRGTPRIANNLLRRTRDFAQVKGN
GYINVEIAEIALSALEVDQNGLDDMDIRILTTIIEKFKGGPVGLSTIATACGEESETIEE
VYEPFLIQEGFLKRTSRGRETTERAYIHLGLTPPYRPGELFS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacgactttttgaaaggttcaggagacgggatgaccaccacggataaagagatt
gagcgggcgctccggccgctttcgttcgaggactttacggggcaggctaaaattctcgat
aacctcgaagtgtttgtgagagcggctatgcaacggggcgacgccctggaccatgtgctg
ctacatggcccaccaggcttgggcaaaacgacgctatcgcacatcatcgcgaacgaactt
aatgcgggtatcaaaatgacctctggtccagtgctcgacaagcccagtgatctggctggt
ctgctgacgaacctacagcctaacgacgtactcttcattgacgagattcaccggctcaat
cccattgtagaagagtatctgtactcggcaatggaggattacaagattgatattatgctc
gactccgggcccaacgcccgaaccgttcagattaaactcaatccatttacgttgattggc
gcgactactcgcgctggtatgctcacttcgccgttgcgagcccgttttggcatcagtgcc
cggctggaatattacgatgctaaactgctaaccagtattgtacagcgttcggcggctatt
ctgggaacgcccattgatgaaacaggggcctatgagattgcacgccggagccggggcaca
ccacggattgccaacaatttgctgcgccgaacccgcgactttgcgcaggttaaaggaaat
ggctatatcaatgtagaaattgccgagatcgctcttagcgcattggaagtggatcagaac
ggactcgacgatatggatattcgtattctgacgactattatcgagaagttcaaagggggg
ccggttggcctgtccaccattgctaccgcctgtggagaagagtctgaaacaatcgaagaa
gtatacgagccgtttttgattcaggaaggctttttaaagcggacctctcgtggccgtgaa
acaaccgagagagcctatattcacctgggccttacaccaccttacaggccgggggaatta
ttctcctaa
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