Salpingoeca rosetta: PTSG_00038
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Entry
PTSG_00038 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_00038
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PTSG_00038
Factors involved in mRNA localization
Other mRNA localization factors
PTSG_00038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
BP28CT
Motif
Other DBs
NCBI-GeneID:
16067822
NCBI-ProteinID:
XP_004998594
UniProt:
F2TVC6
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MDANVASAVQTVQMLRAHQLPDDQPCIEASSSTVNYEASFDTNFQDREGFVSGIAHYVEE
AQNLGTLNDMLEQGRQYAGMLYTWRYISRGVPQASSDDQENRTEIYRITVDVLKPHIDKL
KQFYLFQGSAVQRFCEEVKKLSNPEKLKSFVSETTKITLIKMIDLFATLNALKNAKSSVR
NDCSLYRRAFGILNAGQPTNPEDADIERKLVFFLGTENCLCNDVVTEVRKIPHYLDVMHE
LADTCIRLLETDGYVLPDEKHTLLKAISFIVYIMDDPEEKIGIYKVKKYNHHKYDALFKE
TPVVPLYGDMHMQLLSFVQMGPHYDRAKWPQANEALSSEHIDTYHNITAQLPAFEAERDE
LVSLLALLSTKDVAGRLAVATTERASDVALRGLKTVSRWTTAIRELHGWKLANPTDKYLN
RNCPADAEDYERAVRYNYSAEEKAAVVQIVTMIKDVLRILWKMESMLNLGIRVEIYKETQ
SFIQHNVRDMVRHCIKKKKAKARTVLMGLRNTCADWAAGFEPEDDPYMRGIKDTAYQPPE
IGNRHCGPGSTQLFMMRTMLESLCADDKKKSLKHDLDSKFHGPMLTFYNSTKHYFHLLNF
KSSLQEAADLSQLWFREFYLELSNGKHIQFPIDMSLPWILVDHVLTSQDPGMIEYALYPM
DLYNDAGGFALRAFQKQYLYNEIEAEVDLCFDQFVYKLSENIFRHYRCKAASQVLDEEFK
GDPALKSININQYNNDAHYPSLMRQRHFQLLGRSVNIHRLLSQRLNAKLKQAIDIAIGRF
ESMDLTGIIELELSLKVSRAMHEMLTQHLQLDPYEELLNEANNSVTSAYGRITLQVFAEL
CTDVIPNHCYNTADRRFIRPERAPVFGEGEPQRESAPRAAPEMRFGSKLLNTAYAAVTAK
FTSFFGVEHLSSAVRLLEYRGVALCIEEMLKIVQANITDVLTPYVANLLDGMPKSCRLPL
IDYGSVGAMGFYQLQLKDIMAYPDLQTEVFHSFREVGNSFIIFVLIEQVLSVLEVEETVL
AMPFQGDVPCLVKGGGWCLKRRNGVLQRLRPVLQRIPLITTRMAHCDAAMAKQADVLTKE
RLYKGLSIFKSVTMTFKTMLESDATDHSLWFGAKAPNGVVDVDACTSFYRLWSAVQYTSL
VSAASRGVDQITEFMGDGLYWAGAVIIALLGHRGLFETSDFSYHIIKAFDLDHKDESVSG
VSVPMFVKFARKRRALNNAIFATMERYLFKSKNKAADPAYIPPPGCGIEV
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaacgttgcgtctgcggtgcagacggtgcagatgctgcgcgctcatcagctt
ccagatgatcagccttgcatcgaagcgtcgtcgtccaccgtcaactacgaagcatccttc
gacaccaacttccaggaccgtgagggcttcgtctcaggcattgcccactacgtcgaagaa
gcgcaaaacctcggcaccttgaacgacatgctggagcaaggccgacagtatgcgggcatg
ttgtacacgtggagatacatctcccgaggtgtgccgcaggcaagcagcgacgaccaggag
aaccgcacggagatctaccgcatcaccgtcgacgtgctcaagccacacattgacaagctc
aagcagttttacctgttccagggctcggccgtgcagcgcttctgcgaggaggtgaagaag
ctctccaacccagagaagctcaagtcgtttgtgtcagagaccacaaagatcaccctcatc
aagatgattgatctcttcgccaccctcaacgctctcaagaacgcaaagtccagcgtcaga
aacgactgctccctctacaggcgtgcgtttggcatcctgaatgcgggccagcccaccaac
ccggaggacgccgacattgagcgcaagctcgtgttcttcctcggcacagagaactgcctg
tgcaacgatgtggtgacggaggtgcgcaagatcccgcactacctcgacgtcatgcacgag
ctggcagacacgtgcatccgcctgctggaaacagacggctacgttctccccgacgagaag
cacaccctgctcaaggccatttcgttcattgtgtacatcatggacgaccctgaggagaag
attggcatctacaaagtgaaaaagtacaaccaccacaagtacgacgcgctcttcaaggag
acgccagttgtcccgctgtatggcgacatgcacatgcagctgctgtcgttcgtgcagatg
ggcccacactacgaccgtgccaagtggccccaggccaacgaggccctcagctcggagcac
attgacacgtaccacaacatcaccgcgcagctgcccgcctttgaggccgagcgcgacgag
ctcgtcagcttgcttgccctcctcagcacaaaggatgttgctgggcggctcgctgttgcc
acaacggagcgcgcgagcgacgttgctctccgcggcctcaagacagtctcaagatggacc
accgccattcgcgaactgcacggctggaagctggccaatccaacagacaagtatctcaac
cgcaactgccccgccgatgccgaggattacgagcgcgccgtgcgctacaactactctgcc
gaggagaaggccgccgttgttcagattgtgacgatgatcaaggacgtgttgcggatcctg
tggaagatggagagcatgctcaacctcggcatccgcgtggagatttacaaggagacgcag
tcgtttatccagcacaacgttcgcgatatggttcgccactgcatcaagaagaagaaggca
aaggcccgcaccgtgctgatgggcctgcgcaacacgtgtgcagactgggctgctggcttt
gagcccgaagacgacccgtacatgcgcggcatcaaggacacggcgtaccagcccccagag
attggcaacaggcactgcgggccaggatcaacgcagctgtttatgatgcgaacgatgctt
gagagcctgtgcgctgacgacaagaagaagagtctgaaacacgatcttgactccaagttc
cacgggcccatgctcaccttctacaactccacaaagcactatttccacctcctcaacttc
aaatcgtcactgcaagaggcagctgatttgtcgcagctctggttccgcgagttttacctt
gagctcagcaacggcaaacatatccagttcccgattgacatgtcactgccttggatcctg
gtggaccatgttctcacctcccaagaccccggcatgattgagtacgcgctgtatcccatg
gatctgtacaacgacgctggcgggtttgcgctgcgggcgttccagaagcagtatctctac
aacgagattgaggccgaggttgacctgtgctttgatcagtttgtctacaagctctcggaa
aacatcttccgccactaccgttgcaaggctgcaagccaagtgcttgatgaggagttcaag
ggtgatccggccctcaaatccatcaacatcaaccagtacaacaacgacgcgcactatccc
tccctcatgcgccagcgtcacttccagctgcttggacggtccgtgaacatccaccggctg
ttgtcgcagcgcctcaacgccaagctgaagcaggccatcgacattgctatcggccgcttc
gagagcatggatctcacaggcatcattgagcttgagctgtcgctgaaagtgtcgcgggca
atgcacgagatgctgactcagcacctgcagctggacccgtacgaggagctgttgaacgag
gccaacaactcggtcacctcggcatacggccgcatcacgctgcaggtgtttgcagagctg
tgcacggacgtcatccctaaccactgctacaacaccgccgatcgaaggttcatccgaccg
gagcgggcgcccgtgtttggggagggcgagccgcagcgcgagagcgccccgcgtgctgcc
cccgagatgcgatttggctcaaagctgctcaacacggcgtatgctgcggtgacggcgaaa
tttacgtccttctttggcgtggaacacctgtccagtgctgtgcggctcctcgagtaccgc
ggcgtcgccctctgcatcgaggaaatgctcaagattgtccaggccaacattacggacgtg
cttaccccttatgtggcgaacctgcttgatggcatgcccaagtcgtgccgcctcccactc
atcgactatggttccgttggcgcaatgggcttctaccagctgcagctcaaggacatcatg
gcgtacccggacttgcagacggaggtgtttcattcgttcagggaggttggcaacagcttc
atcatcttcgtgctcatcgaacaagtcctgtctgtgcttgaggttgaagagacggtgctg
gcaatgccattccaaggcgacgtgccgtgcctcgtcaaaggtggcgggtggtgcctgaag
agaaggaacggtgttctgcaacgcctacgccctgtcttgcagcgtattcccctcatcacc
actcgtatggctcattgtgacgcggcaatggcaaagcaggctgacgtgcttactaaggag
cgcctctacaagggcctcagcatcttcaagagcgtcaccatgactttcaagacgatgctt
gagtcggatgccacggatcacagcctctggtttggtgcaaaggcgcccaacggcgtcgtt
gatgtggacgcgtgcacgagcttctatcgcctgtggagtgccgtgcaatacacatcactc
gtctccgccgcttcgcgcggtgtcgaccagattacggagtttatgggcgatgggctgtat
tgggccggcgccgtcatcatcgctctccttggccaccgcggattgtttgagacaagcgac
ttctcgtatcacatcatcaaggcctttgatctggatcacaaggacgagagcgtgtctggc
gtgagcgtgcccatgtttgtcaagtttgcacggaagcggcgtgccttgaacaacgccatc
tttgccaccatggagcgctatctcttcaagagcaagaacaaggctgcagatccagcatac
atcccgccgccaggctgcggcatcgaggtctga
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