KEGG   Salpingoeca rosetta: PTSG_00053
Entry
PTSG_00053        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K11887  proteasomal ATPase-associated factor 1
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:sre03051]
    PTSG_00053
Proteasome [BR:sre03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   Other PIPs
    PTSG_00053
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_DCAF4 Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th MIOS_WD40 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_HVO_0234 Beta-prop_VPS8 eIF2A Beta-prop_IFT122_1st NBCH_WD40 PQQ_3
Other DBs
NCBI-GeneID: 16067932
NCBI-ProteinID: XP_004998608
UniProt: F2TVE0
LinkDB
Position
Unknown
AA seq 401 aa
MAEVRTLPAFSVQHDWQVDVHNPAEAQPFWLAIRPYGADRSYHGKCKVNRDGTLHGTDGY
DVHKLGENTLAIKHEAFADTTWHISCPVKEDKAPFNGKPLSVDVSPAGDLLVCSGTNGSA
AILNTSDLKPLRHLKGHKGDVHTCRFFPSGEVVLTAGADWRARIWSAVDSSNPVSFTHAG
AVRDVAIVDRGRNVLSAAMDGRVRLWDCGTAACLHSFEMDANPTAIALLTCPDIVSSNVE
RVIHEREAGTEGRVVVAASLSRITLIDLRAQHALSSVQVPKPSALCAFDDVHFASGHENG
HISLWDCRKFSEPVVTVSRWEAPVTALTRAPVTVASRGAVVGAADGSCFVLDVDSLQTHE
LSGSNLDPIACVCATPQSVVAAAADSRLRTYTFGAIARPAA
NT seq 1206 nt   +upstreamnt  +downstreamnt
atggcagaggtacgaacgctgcctgcgttcagcgtgcagcatgattggcaagtggatgtc
cacaatccggcagaggcgcagccattctggctcgccattcgaccatatggcgcagacagg
agctaccacggcaagtgcaaagtgaaccgtgatggtacgctgcatggcacggatggatac
gacgttcacaagctgggcgagaacacactggcgatcaagcacgaggcttttgcagacacc
acctggcacatttcatgtcctgtgaaggaggacaaggcccctttcaacggcaagcccctc
tctgtggacgtgtcccctgctggcgatcttctcgtctgctctggcaccaatggcagcgca
gccatcctcaacacctccgacctcaagcccttgcggcacctcaagggccacaaaggcgac
gtgcacacgtgccgcttcttcccgagcggcgaagtggtcctcacagccggtgccgactgg
cgcgcacgcatctggtctgctgtcgacagctcaaacccggtctccttcacgcacgctgga
gctgtgcgggatgttgcaattgttgatcgtggacgcaacgttctctcggcggccatggac
gggcgtgtgcggttatgggactgcggtactgctgcctgtctgcattcgtttgaaatggac
gcaaatccaacggcaatcgccctcctcacctgccccgatatcgtctcgtcaaacgtcgag
cgcgttattcacgagcgagaggctggaacagagggccgcgtcgttgttgccgcttccctc
tcaaggataacactcatcgacctcagagcacagcacgctctgtcttctgttcaagttcct
aagccgtctgcactctgcgcgtttgatgacgtgcattttgcgagcggccacgagaacggc
cacatttcgctgtgggattgcagaaagttcagtgaacctgttgtgaccgtgagccgatgg
gaggcgcccgtcaccgcactcacacgcgcaccagtcactgtcgccagccgcggtgctgtg
gttggcgctgcagacggaagctgctttgtactcgacgttgactcgctccagacgcacgag
ctctcaggatcaaacctggacccgattgcgtgtgtgtgcgcgacgccgcagtctgtcgtc
gctgctgctgcagactcgcgtctccgcacttacacgtttggcgcaatcgctcgaccggca
gcatga

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