Salpingoeca rosetta: PTSG_00156
Help
Entry
PTSG_00156 CDS
T04136
Name
(RefSeq) riboflavin biosynthesis protein RibA
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
sre
Salpingoeca rosetta
Pathway
sre00740
Riboflavin metabolism
sre00790
Folate biosynthesis
sre01100
Metabolic pathways
sre01110
Biosynthesis of secondary metabolites
sre01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
PTSG_00156
00790 Folate biosynthesis
PTSG_00156
Enzymes [BR:
sre01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
PTSG_00156
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
PTSG_00156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
RibD_C
dCMP_cyt_deam_1
MafB19-deam
Motif
Other DBs
NCBI-GeneID:
16067383
NCBI-ProteinID:
XP_004998708
UniProt:
F2TVP0
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MEAHTDRDASCCNTITEALAALRQGKPVVVMDDLDRENEACRGDLVVAAEFATKESLAFM
CRHSSGLLCAPITEQRARELDLAPMVTTNTDRNSTAFTVSIDVLEGTTTGASAGDRALTA
RALTSASATPASFSRPGHLFPLVARDGGVLVRNGHTEASVDLCRLAGLQPAAVIAELMHP
CGDMMRFDACRQFASTHDLPIITIADLQVYVRDQQQQRQYEEATEKQEPGHTALNTNLPD
SVLVKVYREVGTDLEHVALVKGDIANKPDVLTRVHSVCLTGDVFHSLRCDCGPQLQAALA
QIDTAGCGVLVYMRGHEGRGIGLGNKIKAYAQQQQHRLDTYQANESLGFPSDLRTYEIAD
AILHSLRPASVCLLTNNPLKPTALARVRVSHVKQLRLAPSLTSAAYVLAKHKREQEIATA
LRSTVVGGSAGDLAAIVADDNCKDTRNNDGSSSSNNNNNNSSGNRCVVDEDHLHDSSRGS
TASPNTNASSPTPASTPVASIGGDVSGVAVTVSSAVTNASCFSNANNVTTSSIDTTTTTT
TTTTSGSSKGLLASSPALELPPHVLDCLQANATQVPAAVDELFMRRALSLARLGRVSAPP
NPWVGCVLVRDGHVIGEGYHRRAGMPHAEIEAMADAVLRAGIDIMEHGGAAAALADTPFA
AFANTAAAQTHRLLQRGKSKRAASEAKSTTAKTPSACTLTTATGVVEAVRAVLAGATAYV
TLEPCHHQGRTGPCDQALVQAGVARTVIAVTDPDERVSARGLAFLRSRGVEVATGVCGAE
AEALLAPYLHQRRTGRPLCVIKTAISIDGRVACKDATSKWITGPLARARAHKMRAESQAV
LCGIGTALADNPTLNVRLALASLPPGERAAFAPAMHAASPSPVTVAGAGAHFGRGMPLVR
VVLDARGRLFEGRLLDTSIAPTIVYTSRDCSAQALKTWAAHGVEAVVVDTACASGYAGAC
RGVDTRVGGDAAAPVLLDLMQVLRDLAKRGVLQVLVEGGAQVHSSFVQQGLGDQLAVFVG
PKLLGGTAVPWLPDELASTMAHARTYSLVRVETFAAAARQQQGDGTDSSEHKQGKEVSTG
GDILCVYRKAD
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcacacggatagggatgcaagctgctgcaacaccatcacggaagcgctggca
gcgctgcggcagggaaagcccgtcgtggtgatggacgaccttgaccgcgagaatgaggca
tgtcgtggagatttggtggtggcagccgagtttgccaccaaggagtcactggcgttcatg
tgccgtcattcgtcaggcctcctctgcgctcccatcaccgagcagagggcgcgggagctt
gacctggcgccgatggtgacaaccaatacggaccgcaacagcaccgcattcaccgtgtcc
atcgacgtactggagggaacaacgactggcgcatctgctggggacagggccctgacggcc
cgcgcgctcaccagcgcctccgctaccccagcctcgttctcacgacccgggcacctcttc
ccgctcgtcgcacgcgatggtggcgtgctcgtgcgcaacggccacacagaggcatcggtg
gatctgtgccgcttggcagggctgcaaccggcggcagtcatcgcagagctcatgcaccca
tgtggtgacatgatgcgcttcgatgcctgcaggcagtttgcaagcacccacgacctcccc
atcatcaccatcgccgaccttcaggtgtacgtgcgtgaccagcagcaacagcgccaatat
gaggaggctacggagaagcaggagcctggccacactgctctcaacaccaaccttccagac
tccgtcctcgtcaaggtgtaccgagaagtgggcacagaccttgaacacgttgctcttgtc
aaaggcgacatcgccaacaagccggacgtcttgacacgtgtgcactcggtgtgcttgaca
ggcgacgtgttccacagcctgcgctgcgactgtgggccccaactgcaggcggcacttgca
cagatcgatactgctgggtgtggggtgctggtttacatgcgtgggcacgaaggtcgcggc
attggtcttggcaacaagatcaaggcctacgcccagcagcagcaacatcgcctcgacacg
taccaggcgaacgagtcgcttggatttccgtcggatctgcgcacgtacgagattgccgac
gcaattctgcacagcctccgcccagccagcgtgtgcctgcttaccaacaacccactcaag
cccaccgccctggctcgcgtgcgtgtgtcacacgtcaaacagctgcggctcgcgccgtct
ctgaccagcgccgcgtacgtgctggcaaagcacaagcgcgagcaagagattgccactgct
ttgcgcagtacagtcgttggtggcagcgctggggaccttgcggccattgtcgcagacgac
aactgcaaagacacacgcaacaatgacggcagcagcagcagcaacaacaacaacaacaat
agcagcggcaacagatgtgtggttgacgaggaccatctgcacgatagcagccgcggctct
acagcatctcccaacaccaacgcttcgtcccccacgccagcaagcacacccgttgcatcg
attggcggtgatgtcagcggcgttgcagtgacagtgtccagcgcagtcaccaacgcaagc
tgcttctccaacgccaacaacgttaccacgagcagcatcgacaccaccaccaccaccacc
accaccaccaccagcggcagcagcaaggggttgctcgcgtcatcgccggcattggagctg
ccgccacatgtcctggattgcctgcaagcaaacgcgacgcaagtgccagcggccgttgac
gagctgttcatgcggcgcgcgctgtccctggcgcggctgggccgtgtgagcgcgccgcca
aacccttgggttggctgcgtgcttgttcgcgacggccacgtcatcggcgagggctaccac
cggcgcgctggcatgccgcatgccgagattgaggccatggccgacgccgtgctgcgtgca
ggcatcgacatcatggagcacggtggcgccgctgctgctctcgctgacacgccgtttgcg
gcctttgccaacacggctgccgcccagacgcacagactgctgcagcggggcaagagcaag
cgtgctgcgagtgaggccaagtccaccactgcgaagaccccaagcgcatgcacgttgacc
actgctacgggtgtggtggaagcggtgcgagctgtactagctggcgccacggcgtacgtc
acgctggagccctgccaccaccaggggcgcacgggcccatgcgaccaagcccttgtgcag
gccggcgttgcacgcacggtgattgcggtcacggatcccgacgagcgggtgtctgcgcgt
gggctggcgtttctgcgctcgcgtggcgtagaggttgccacgggcgtgtgtggggcggag
gcggaggcgctcttggcgccgtacctacaccagcggcgcacgggccgacccttgtgcgtc
atcaagactgcgatcagcatcgacgggcgcgtggcgtgcaaggacgccacctccaagtgg
attacggggccgctcgctcgcgcgcgcgcacacaagatgcgggcggagtcgcaggcggtg
ttgtgtggcatcggcacggcgcttgccgacaacccaactctcaatgtgaggcttgcgctg
gcctcgctcccgcccggagagcgcgctgcgtttgcacctgccatgcatgcagcttcaccg
tcgcccgtgactgtcgctggcgcgggtgcacacttcggaagggggatgccgcttgtacgg
gtggtgctggatgcaaggggccgcttgttcgagggccgcctccttgacacgtccattgcg
cccaccattgtgtacacgagccgcgactgctctgcacaggcgctcaagacctgggccgcg
catggggtggaggctgtggtcgttgacacagcttgtgccagtggttacgctggcgcttgt
aggggcgttgacactcgtgttggcggtgacgctgcggcgccagtgctgctggatctgatg
caggtgctgcgcgacttggccaagcgcggtgtgctgcaagtgcttgtggaaggcggcgcg
caggtgcactcgtcgtttgtgcagcaggggttgggcgaccagcttgcggtgtttgtgggg
ccgaagctgcttggcggcacagctgtgccctggctccctgacgagctggcatccaccatg
gcacacgcgcgcacctactcgcttgtgcgcgtggagacgtttgctgccgctgcacgtcaa
caacagggcgacggcaccgacagcagcgaacacaaacagggcaaggaggtgtccacgggt
ggcgacattctctgcgtgtatcgcaaggctgattga
DBGET
integrated database retrieval system
