Salpingoeca rosetta: PTSG_00325
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Entry
PTSG_00325 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sre
Salpingoeca rosetta
Pathway
sre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PTSG_00325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_00325
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_00325
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PTSG_00325
Coactivators
SAGA/TFTC/STAGA complex
PTSG_00325
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
PTSG_00325
STAGA complex
PTSG_00325
TFTC complex
PTSG_00325
SAGA complex
PTSG_00325
SLIK complex
PTSG_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CENP-S
CBFD_NFYB_HMF
DUF6752
Motif
Other DBs
NCBI-GeneID:
16067762
NCBI-ProteinID:
XP_004998877
UniProt:
F2TW61
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MSVFPSEMVRVVAEAGRFPTITDDVCRVLAADLEYRIREIAQDAAKFTRHGRRRRMTTDD
INAAMRVRNMEPVYGYPSGSHTGTVESLFKRAKESDVFYIPDTVKRVHEIIGAPLPSMPA
EMTFTSHWLAIEGEQPTIPQNPPVHTTHTAEPEEGQEPAAKAPKLKEGKPREEVEIKQLE
KHTLSREQQLLFNYIIKDLLGADKTAKQAALKTLSTDHGLHQLVPFFMEFIRSQTTEHAS
DPNAIASVVGMVDALVQNNNVYLEPYLHHVIPVVATCAVSKKLASYAPDHLALRVRAAQV
AVSICVKYGTKYHDLQPRILKVFQDVLKRRRSLLSYYGAIKGLAAFGPRVVDLYLVDAAP
EAMRLISLRRRDATEFSIVIAALRDALLEAYKFLVVDGHAASIPETRQRYAALVDVVPEL
SLPALPTDTTTASSDGDDDGKTTEGSVGASAGQTPAEGTAAATEGDAMDTTSPGSGGSRD
DAAEDVQAASSKPQGEEDQQQHPRSPADKEERKSVEQKDDAVKGQKGAGNEDGEAKDKQD
AGGEEDTKEKQKEGTKKDDDAKETLTGTGDDTAQMDTAEDAAN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtttccgagcgagatggtgcgcgtggtggcggaggccggtcgctttcctacc
atcactgacgacgtgtgccgggtgctcgctgcagacctggagtatcgcattcgcgaaatc
gcacaggatgctgccaagtttactcggcatgggcggcgacgcagaatgacgacagacgac
atcaacgctgccatgcgtgtgcgaaacatggagcctgtgtatggctatccctctggaagc
catactggcactgtggagagcttgttcaagcgtgccaaggaaagcgacgtcttctacatt
ccagacaccgtcaagcgcgtgcacgagattatcggtgctccactgccatcgatgccggca
gagatgacgttcaccagccactggctcgccatcgaaggggaacaacccaccatcccacaa
aacccgccagttcacacgacccacacagcggaaccagaagaggggcaagagcccgcagcc
aaggcgcccaagctgaaggaaggcaagccgcgggaagaagtggagatcaagcagctggag
aagcacacgctcagtcgcgagcagcaactgctcttcaactacatcatcaaggacctcctt
ggtgcggacaaaacggcgaagcaagcagcactgaagacactgtctacagaccacggcctt
caccaactcgtccctttcttcatggagttcattcgatcacagacgactgagcacgcctcc
gaccccaacgccatcgcgagtgttgtcggcatggttgatgcactggtgcagaacaacaac
gtctacctcgagccctatctgcaccacgtcatccccgtcgttgcgacgtgtgctgtctcg
aagaagcttgccagctatgccccggaccacctcgcccttcgcgtccgcgcagcgcaggtc
gccgtcagcatctgcgtcaagtacggcaccaagtaccacgacctccagccgcgcatattg
aaggtgttccaggatgtgctgaagcggcggcgctcgctgctgtcgtactacggtgccatc
aagggcctggctgcgtttggaccgcgtgttgttgatctgtatctcgttgacgctgcacca
gaggcgatgcggctcatctccctgcgccggcgcgacgccacagagttcagcatcgtcatt
gccgccctccgcgatgccctgctcgaagcgtacaagtttcttgttgttgacggccacgct
gcgtccatccccgagacacggcagcggtacgccgcgctggtggatgttgttcccgagctg
tctctccctgcactcccaacagacaccaccaccgcctccagtgatggtgatgatgacggg
aagacgacagaaggaagtgtgggcgcatctgctggccagacacctgcagagggaacggcg
gcggcgacggagggcgatgcaatggataccacgtcacccggcagtggcgggagcagagac
gatgcagcagaggatgttcaggctgcttcgtccaagccgcagggtgaggaggatcaacag
cagcacccacggtcaccagcggacaaggaagagaggaagagtgtggagcagaaggatgat
gctgtgaagggacagaagggcgctgggaacgaggatggtgaggcgaaagacaagcaagat
gcaggtggcgaggaagacacaaaggagaagcagaaggaaggcacaaagaaagacgatgac
gcgaaggagacactaactggtacgggtgatgacacagcacagatggacaccgctgaggat
gcggcaaactag
DBGET
integrated database retrieval system