Salpingoeca rosetta: PTSG_00418
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Entry
PTSG_00418 CDS
T04136
Name
(RefSeq) chromodomain helicase DNA binding protein 1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_00418
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
PTSG_00418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
Chromo
ResIII
HDA2-3
DEAD
CDH1_2_SANT_HL1
Myb_DNA-binding
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-GeneID:
16067794
NCBI-ProteinID:
XP_004998967
UniProt:
F2TWF2
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MASELQLDEFAFQGKSQQVSPATGSAAEAATSDSPATESIEHTQPDADTGNGYDESENDD
SSRQRRMSDTSYNAEEDEEDDDDDDGDNDDGSGAYHDSNESTSDSGSDEPASLRGNKARK
SRFARDTVVEEAIANPELFGLRRSGRERRQRRDRLEEMYKQEEAARQAARSTRRKTTAKG
RKTRGAGGGGRRRKARSQWTSSDDDDNDDDDDEDDDDDDSDESDSSGDWGARNRRGGGGG
RGRQASESDESEESDGWVPGNARPKRSKRTTRRRTKRRGRGGDSDDDDDDDDYSAHIPQR
ISFRNTGRSVNYRESDTDEGLDEEERLAIRAAQQTEDTRERINLIVVHKQRKDVVQEMRH
LLSLEEIIAGEKEAPPGKTLEEIQEDIDSSLVSVLGKSEEDAAQLEQGGDGDDMLYCINW
VGRSHIHNTWHTAGELRSMDIAGVKKLDNYRRDVRLREESLNDPKTTTEDREYFNCQLEM
HYEALAKHKVVERIVLNRTLGHGQTWDDDDDVEYLCKWFGLDYDCNTWESANLICPRFQS
LVDEYLERQNSSTLPTTTTRRKREPFRMIRQQPSWLPDPDLSLRDYQLQGVSWLARSWCD
GNSVILADEMGLGKTIQSIVFLSYLFNVQRVYGPFLIVVPLSTIMAWSRELHKWAPAMNT
IVYVGNKASREAIRDHEFYNDRGKIKFNVLLTTYEKVNTNLDDLQQIRWAALVVDEAHRL
KNHESMLHQALSDLRHDFRLLVTGTPLQNSMKELWALLHFIMPRTFASWEEFEERYGGLG
DDAAANHKMLQTLHEDIKPYLIRRVKKDVEKSLPKKVEKILRVGLSQSQKQIYKHIITKN
YTALRSLKKGQKSSLVNVIMELKKCCNHASLIDQAPLSNPDVSPTENMRNLLKGSGKLIL
LDKLLQRLHDKGHRVLIFSQMVLMLDVLATYLMMKGYPFQRLDGNIPNERRKQAIDHFNA
PGSADFCFILSTRAGGLGVNLATADTVIIFDSDWNPQNDLQAQARAHRIGQTRQVNIYRF
VSKNTVEEDILERAKKKMVLDHLVIQRMDTTGSSVLNLQKKKSGGVEYNKEELDAIIKFG
AADLFGEQESSSSGGGGGGDSGDQDLKLDLDTVLEQAETHDTQEAATGMSDELLSAFKTV
DIETNEEELDEVARKEAEERAKQEEAEKAKAKALADEIAAKESQAVKSWDEILPEDVRKQ
AALEEQVEKMKQLYLPPRKRKQPVLYGQDDDDDDDDAGPSSAGRARSKPLKELEEAKVGT
FTAEEVRNLVIAVRKFGDYENKAETITAEANMKDRDASEIKRLLDWLFTKCSERRQAMAK
ETDAAKKKDLRRLSLGKQPINTEEYLFRIEGLTLLHKLIQNAKGPFRVHTKVKMPKWDCE
WKPTDDANLLVGVDKYGLGAWDKVKADTSLKLGSLILQEKGKKPQENHLKNRVETLLKEL
IKTKLRKPLQLTSAGKKRSSTNATPGKKSKQTSVKSFVERIPKKKAAASAGSDDEFQKKQ
ITPKLVTKWMQPVAAHIKTLADEGAEFEDKSGHL
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagagctgcagttggatgagtttgcctttcagggcaagtcgcagcaggtgtcc
ccagcaactggcagtgcagccgaagctgccacctcagactcgcctgccaccgagagcatc
gagcacacgcagcccgatgcggacactggcaacggttacgatgagagtgagaacgatgac
agcagccgacagcgacgcatgagcgacacatcgtacaatgcagaggaggacgaggaagat
gatgatgacgacgatggggacaatgatgatggcagcggcgcatatcacgacagcaacgag
tccaccagtgacagtggctctgatgagccggcatctctacgagggaacaaagcccgcaag
tcgcggttcgcgcgcgacacggtggtggaggaggcaattgcaaatccagagctgtttggg
ctgcggcggtctgggcgcgagcggcgacagcggcgcgacagattggaggagatgtacaag
caagaggaggctgcacgacaggctgcacgcagcacacgccgcaagacaacagcaaaaggg
cgcaagacgcgcggtgctggtggtggtggcagaagaagaaaagcaagatcccagtggacc
agcagcgacgatgatgataatgacgacgacgacgacgaggatgatgatgatgatgacagc
gacgagagtgactcctcgggcgattggggggcgcgcaacaggcgtggtggtggcggcggc
cgcggacggcaggcctctgaatccgacgagagcgaggagagcgacggatgggtgccgggc
aacgccagacccaaacgaagcaagcgcaccacgcgccgtcgcaccaagcggcgcggccgt
ggcggcgacagtgacgatgacgacgatgacgacgactacagtgcgcacatcccgcagcgc
atcagcttccgcaacacgggccggagcgtgaactaccgcgagtcggatacagacgagggc
ctggacgaggaggagcgcctcgccattcgcgccgcgcagcagaccgaggacacgcgcgag
cgtatcaacctgatagtcgttcacaaacagaggaaggacgtcgtgcaagagatgcgccac
ttgctctcgctcgaagaaatcattgctggcgagaaagaagctccgccgggcaagacgctg
gaggagattcaagaggacattgattcgtcgctggtgtccgtccttgggaaatcagaagaa
gacgcagcacagcttgagcagggtggcgacggcgatgatatgctgtactgcatcaactgg
gttggccgctcccacatccacaacacctggcacaccgccggggagctgcggtcgatggac
atcgccggggtgaagaagttggacaactaccggcgcgacgtgcgactgcgagaagagtca
ctcaacgatccaaagacaacaacagaggaccgcgaatacttcaactgccagcttgagatg
cactacgaggcgctggcgaaacacaaagttgtggagcgaattgtgctcaaccgaaccctg
ggccacgggcagacgtgggacgacgacgatgacgtggagtacctgtgcaagtggtttggt
ctcgactatgactgcaacacatgggagtctgcaaacctcatctgcccacggtttcaatcg
ctcgttgacgagtacctggagcgacagaactcgagcacgctgcccaccaccacgacacga
cgcaagcgcgaaccgtttcgtatgatccgccaacagccgtcctggctcccagacccagac
ctctccctcagagactaccagctgcaaggcgtgagctggctggcgcggtcgtggtgcgac
ggcaattccgtcatcctcgctgatgaaatgggcctcggaaagacaatccagagcatcgtg
tttctgtcctacctcttcaatgtgcaacgcgtgtacggcccgtttctgattgtcgtgccg
ctgtcaaccatcatggcgtggtcgcgagagctgcacaagtgggcgcctgccatgaacacg
attgtgtatgtcggcaacaaggcgtcacgcgaggcgatacgcgaccacgagttctacaac
gaccgcggcaaaatcaagttcaacgtgcttttgacgacatacgagaaggtgaacaccaac
ctggacgacctgcagcagattcgctgggcagcactggtggtggacgaggcgcaccggctc
aagaaccacgagtccatgctccaccaggctctcagcgacctgcgacacgactttcgcctc
ctcgtcacgggcaccccgctccagaactcgatgaaggagctgtgggcgcttttgcatttc
atcatgcccaggacgtttgcgtcatgggaggagtttgaggagcgatatggcgggctgggt
gacgacgcggccgcaaaccacaagatgctgcagaccctgcacgaggacatcaagccctac
ctcattcgcagagtcaagaaggacgtcgaaaagtccctgccaaagaaggttgagaagatc
ctgcgtgtggggctaagccagtcgcagaagcaaatctacaagcacatcattaccaagaac
tacacggccctgcgcagtctgaagaagggccagaagtccagtcttgtgaacgtcatcatg
gagctcaagaagtgctgcaatcatgcctccctcatcgaccaggcccccctctcaaaccca
gacgtctccccaacagagaacatgcggaacctgttgaaagggagcggaaagttgatcctg
ctggacaaactcctgcagcggctgcacgacaagggccaccgcgtgctcatcttctcccag
atggtgctgatgctcgatgtgctggcgacatatctcatgatgaaagggtacccgttccag
cgactggacggcaacatccccaacgagcggaggaaacaggcgattgatcacttcaacgcc
cctggctcggccgatttttgcttcattctctccacacgcgctggcgggcttggtgtcaat
ctcgccaccgcagacactgtcatcatcttcgattcagactggaatccgcaaaatgacctt
caggcccaagcgcgcgcgcaccgcattggccagacaagacaggtgaacatctaccggttt
gtgtcgaagaacacggtcgaagaagacattctcgagcgcgcgaagaagaagatggtcctc
gatcacctcgtgatccagcggatggacacgacggggagcagcgtgctgaatctgcagaag
aagaagtcgggtggggtcgagtacaacaaggaggagctcgacgcaatcatcaagtttggc
gccgcagacctgtttggcgaacaggagagcagcagcagcggcggcggcggcggtggtgat
tcaggtgaccaggacctcaagcttgatctcgacacggtgcttgagcaagcagagacacac
gacacgcaggaggcggcaacagggatgagcgatgagctgctgtcggcgttcaagacagtg
gacattgagacgaacgaggaagagcttgacgaggtggcgcggaaggaagccgaggagcgg
gcgaagcaggaggaggcagagaaggccaaagccaaggcgctggcagacgagattgcagcc
aaggagagccaggccgtcaagtcgtgggatgagattttgccggaggacgtgaggaagcaa
gcggccctggaggagcaggtggagaagatgaagcagctgtatcttcctccgcgcaaacgc
aaacagccggtgctgtacgggcaggacgatgacgacgatgatgatgatgcaggtccgtcc
tcagctgggcgggcgcggtcgaaaccgctcaaggagcttgaggaagcaaaggtgggcacg
tttacagcggaggaggtgcgcaatctcgtcattgccgtgcgaaagtttggcgactacgag
aacaaggcggagacgataacggcggaagcgaacatgaaggaccgcgacgcgtctgagatc
aagcgactcctggactggctctttaccaagtgctcagagcgccgacaagcgatggcgaag
gagacggatgcggcgaagaagaaggacctgcggcgcctctctctgggcaaacagcccatc
aacacggaggagtatctcttcaggattgaaggtcttacacttctccacaagctcattcag
aacgcaaaggggccatttcgtgtccacaccaaggtgaaaatgcccaagtgggactgcgag
tggaagccgaccgacgatgcgaatttgctggtgggtgttgacaagtatggtctgggcgcc
tgggacaaagtcaaggctgataccagcctcaagctcggctccctcattcttcaggagaag
ggcaagaagccgcaagagaatcatctgaagaaccgcgtcgaaacgcttctcaaggaactc
atcaagacaaaactcaggaaacctctgcagctcacctcagcgggcaagaagcgttcgtca
accaacgccacgcccgggaagaaatcgaagcagacgtctgtcaagtcctttgttgagcga
attccgaagaagaaggctgcggcgagtgccggcagcgacgatgaattccaaaagaagcag
atcaccccaaagcttgtcacgaaatggatgcaacctgttgccgcgcacatcaagacgttg
gcggatgagggcgcagagtttgaggacaagagcgggcacctctga
DBGET
integrated database retrieval system
