Salpingoeca rosetta: PTSG_00442
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Entry
PTSG_00442 CDS
T04136
Name
(RefSeq) transcription activator
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
sre
Salpingoeca rosetta
Pathway
sre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PTSG_00442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_00442
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_00442
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
PTSG_00442
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
PTSG_00442
RSF complex
PTSG_00442
WICH complex
PTSG_00442
B-WICH complex
PTSG_00442
NORC complex
PTSG_00442
BRF complex
PTSG_00442
NuRF complex (fruit fly)
PTSG_00442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
CHDII_SANT-like
DUF4800
Motif
Other DBs
NCBI-GeneID:
16067728
NCBI-ProteinID:
XP_004998992
UniProt:
F2TWH7
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSDTEQKLAVDGEEAARKQQTDAMDVAADDGEATTDATAANGATKEEDEEASENDESNGN
GDVEDEERSPSSNASEESSKAGDNEEEGQEDEEDDGDDEDEDDEEDDDEGADEDEKVKEE
QDDLHKGYVWPDRETRNVEIRRKIAQDQPKRIHYLVEETELFDHLVDLESVRRVDPRGKK
RRPGAGAASSGGGASRRHRKTEKEEDEELLKEEAEVEDDHVHFTESPNYIAGGKMRDYQL
RGLNWLIGLHANSVGGILADEMGLGKTLQTISLLGYLKNFRRMDGPFLLLVPKSTLKNWM
RELAKWCPTLKAVCLTGSKEERPKIIEEQIMPGQWDCVVTSYEICVIEKSALKKFVWEYI
VIDEAHRIKNEKSKLSLIAREIESRNRLLITGTPLQNNLHELWALLNFLLPDIFQSSEEF
DKYFHAENLQQESMVHKLHSVLKPFLLRRLKKEVEKSLPPKKEIKVYVGMSKMQRDWYKN
ILMKDIDTINGAGRVEKMRLLNILMQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNSGKLV
VLDKLLTKLKAQGSRVLIFSQMTRMLDILEDYSWWRGHKYCRLDGSTAHEIRGEMIDDFN
RPNSDKFMFLLSTRAGGLGINLYTADVVIIYDSDFNPQMDLQAQDRAHRIGQTKEVRVFR
FITEKTVEERIVERAEMKLRLDAVVIQQGRLSDKQKQLSSGDMLNMIQFGADHIFRTTEA
TVTDEDIDAILSRGETKTEEFNKKLEAMGESNLLKEFTFDTQSSSILEFEGEDYRKKRER
KKPMRWIEPPKRERRQAINVNKYFSELLGTSNTTKAPKAPKPPKQPKIEEFQFYPARLTE
LLQREVYAYRKAVGYKVPKKPVEGVWTDEQEEERQKEQALVDTAEPLTEAELEEKEKLLQ
QGFKSWQKRDFQQFVKANERWGRDNIEKIAQEIDSKTFEEVQEYAKVFWKKYKTLSNADQ
IMAQIERGESKIQRRLEVQEYLDRKVAQYKLPLQQLHLHYGGSRGKNFTEEEDRFLVCGL
QRIGFDADNVYEELRRQIRAAPQFRFDWFIKSRTATELQRRCNTLISLIEKELKDADAKA
KKDRKKKQGKRKSEASSSSKKSKKSK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacagagcagaagctggcagtggacggcgaggaggccgccaggaagcagcag
acagacgcaatggacgttgcggcagatgatggtgaagcaacgacagacgccacagccgcc
aatggcgccacaaaggaggaagacgaggaagcgtcagaaaacgacgaaagcaacggaaat
ggcgatgttgaggatgaggagcgcagcccatcgtccaacgcttccgaggaatcgagcaag
gctggcgacaatgaagaagagggtcaagaggatgaggaagacgatggtgatgatgaggat
gaggatgacgaggaggatgacgacgaaggtgcagacgaagatgagaaggtgaaggaagag
caagatgacctgcacaaaggctacgtgtggccagaccgcgagacgcgcaacgttgaaatc
cgccgcaagattgcccaggatcagccgaagcgcatccactacctggttgaagagacggag
ctgtttgatcaccttgttgaccttgaaagcgtgcgccgcgttgacccccgcggcaagaag
cgccgccccggtgccggtgccgcttccagcggcggaggtgcctcgcgacgccatcgcaag
accgagaaggaggaggacgaagaacttctcaaggaggaggccgaggttgaagacgaccac
gtccacttcactgagtcgcccaactacattgctggtggcaaaatgcgtgattaccagctg
cgcggcctcaactggctcattggtctgcacgccaactctgtcggcggcatcctcgctgat
gaaatgggtctcggcaagacgctgcagaccatttcgctgcttggatacctgaagaacttc
cggcgaatggatggccccttcctgctgctcgtgccaaagagcacgctcaagaactggatg
cgcgagctggcaaagtggtgcccaaccctcaaggcggtgtgcctgacgggcagcaaggag
gagcgccccaagatcattgaggagcagattatgcccgggcagtgggactgcgtggtcacc
tcgtacgagatttgcgtcattgagaagtcggcgctgaagaagtttgtgtgggagtatatt
gtgattgacgaggcgcaccgcatcaagaacgagaagagcaagctgtcgctcattgcgcgc
gagattgagagccgcaaccgcctgctcatcacgggcacgccgctgcagaacaacctgcac
gagctctgggccctgctcaactttctcctgccagacattttccagtcgtcggaggagttt
gacaagtacttccacgcagagaacctgcagcaggagagcatggtgcacaagctgcactcg
gtgctcaagccgtttctgctgcgccgcctgaagaaggaggtggagaagagcctgccgccc
aagaaggagattaaggtgtacgtcggcatgagcaagatgcagcgcgactggtacaagaac
atcctcatgaaggacattgacaccatcaacggcgccggacgcgtggagaagatgcgtctc
ctcaacattctcatgcagctgcgcaagtgctgcaaccacccgtatctttttgacggcgca
gagccgggcccgcccttcaccacggaccagcacctggtcgacaactctggcaagctggtt
gtacttgacaagctgctgaccaagctcaaggcacagggctcgcgcgtgctcatcttctcg
cagatgacgcgtatgctggacatccttgaggactactcctggtggcgcgggcacaagtac
tgccgcctggacggctccactgcccacgagattcgcggcgagatgattgatgacttcaac
aggccaaacagcgacaagttcatgttcctcctcagcacccgtgccggtggtcttggcatc
aacctctacacggcagacgtcgtcatcatctacgacagtgatttcaacccccagatggat
ctccaagctcaggatcgcgcgcatcgcatcggccaaaccaaagaggttcgcgtgttccgg
ttcatcacggagaagacggttgaggagcgcatcgttgagcgggcagagatgaagcttcgc
ctcgacgccgtagtcatccagcaagggcgcctcagcgacaagcagaagcagctctcctct
ggcgacatgctcaacatgatccagtttggtgccgaccacatcttccgcacgacagaagcg
acggtgacggacgaggacattgacgccatcctgagtcgtggtgaaacaaagacggaggag
ttcaacaagaagcttgaggccatgggcgaatccaacttgctcaaggaattcacctttgac
acccaatcatcgagcatcctggagtttgagggcgaggactaccgcaagaagcgggagcgg
aagaagcccatgcgctggattgaaccgccaaagcgcgagcgccgccaggccatcaacgtc
aacaagtacttcagcgagctgcttggcaccagcaacaccacaaaggcgccgaaggcgccc
aagccgccaaagcagcccaagattgaggagtttcagttctacccggcgcgcctaacagag
ctgctgcagcgtgaggtttacgcatatcgcaaggctgtcggctacaaggtgccaaagaag
cctgttgaaggtgtgtggacagacgagcaagaggaagagcggcagaaggagcaggcgctc
gtcgacacggccgagcctctcactgaggccgaactggaggaaaaggagaagctgttgcag
cagggcttcaagtcttggcagaaacgtgatttccagcagtttgtcaaggccaacgagcgc
tggggccgcgacaacattgagaagattgcacaggagattgattccaagacctttgaggaa
gtgcaagaatatgccaaggtgttctggaaaaagtacaagaccctctccaatgcggaccag
attatggctcaaattgagcgtggtgagagcaagatccagcgccgccttgaggtgcaggag
taccttgaccgcaaggttgcccagtacaagctgcctctgcagcagttgcatctgcactac
ggcggcagccgcggcaagaacttcaccgaggaggaggaccgcttcttggtgtgcggtctt
cagcgcatcggctttgatgcagacaacgtgtatgaggagcttcgtcgccagatccgggct
gcgcctcagttccggtttgactggttcatcaagtcgcggacggccacggagctgcagcgg
cggtgcaacacgctcatctcgctcattgagaaggagctcaaggacgccgacgccaaggca
aagaaggaccgcaagaaaaagcagggcaagcgcaagtcagaggcttcgtcgtccagcaag
aagtcgaagaagtccaagtag
DBGET
integrated database retrieval system
